Pimelobacter simplex: KR76_06000
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Entry
KR76_06000 CDS
T03528
Name
(GenBank) G:T/U mismatch-specific uracil/thymine DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
psim
Pimelobacter simplex
Pathway
psim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KR76_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_06000
Enzymes [BR:
psim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
KR76_06000
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KR76_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIY16423
UniProt:
A0A0A1DIP4
LinkDB
All DBs
Position
complement(1201015..1201626)
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AA seq
203 aa
AA seq
DB search
MARRTFTRAELESFRDAVVPDLLPNAPDQRLRLLFVGINPGLWTAATQTHFAHPGNRFYP
ALLRGGVITEPIDPADGMSDADRTMMRERGIGISNVVHRATAKASELSSEELREGGVQLT
ALVAREKPDVVAIAGITAYRTAFGHPKAVMGRQPATLDDLWSGAELWVVPNPSGLNAHET
VETLAAAYREVAVAAGIVTDAPS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgtcgtaccttcacccgagccgagctggagtccttccgcgacgccgtcgtcccc
gacctgctgccgaacgccccggaccagcggctgcggctgctcttcgtcggcatcaacccc
ggcctgtggaccgccgccacgcagacccacttcgcccacccgggcaaccgcttctacccc
gcgctgctgcgcggcggcgtcatcaccgagccgatcgaccccgccgacggcatgtccgac
gccgaccgcacgatgatgcgcgagcgcgggatcgggatcagcaatgtcgtccaccgggcc
acggccaaggcgtccgagctgagcagcgaggagctgcgggagggcggcgtccagctcacc
gcgctcgtcgcccgcgagaagcccgatgtcgtcgcgatcgccggcatcacggcctaccgg
accgcgttcgggcaccccaaggccgtgatgggccgccagccggccaccctggacgacctc
tggtccggcgccgagctgtgggtggtgccgaacccgagcgggctcaacgcccacgagacg
gtcgagacgctcgccgcggcctaccgcgaggtcgcggtggcggcggggatcgtcacggac
gcgccgtcgtag
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