KEGG   Pimelobacter simplex: KR76_06090
Entry
KR76_06090        CDS       T03528                                 
Name
(GenBank) Protein RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
psim  Pimelobacter simplex
Brite
KEGG Orthology (KO) [BR:psim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psim03016]
    KR76_06090
Enzymes [BR:psim01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     KR76_06090
Transfer RNA biogenesis [BR:psim03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    KR76_06090
 Prokaryotic type
   tRNA splicing ligases
    KR76_06090
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: AIY16437
UniProt: A0A0A1DIH4
LinkDB
Position
complement(1216523..1217704)
AA seq 393 aa
MHKITPKLLSWASILEQGTREQAMTTARMPFIHPHLALMPDAHLGLGATVGSVIPTLGAI
IPAAVGVDIGCGMIAMRTRLTTDELPADRRPLREAIERAVPLSAGAANKTISRPHTERRL
DELTAAADQAGFAPGRYASRWDLQLGTLGSGNHFIEVTVDEEQRVWLFLHSGSRGVGNKI
AQHHIKVARELCEKWWIKLPDKDLAYLAEGTDEFWAYIREMRWAQRYALLNREEMMDRVV
RQFAEWVGLGSADELERVEEINCHHNYTEQETHFGRKVWLSRKGAINAERGRPGLIPGSM
GTASYVVSGLGNPVALHSAPHGAGREYSRSKARRTFTHEQLREAMAGIEYRDTDAFIDEI
PAAYKDIDRVMADAADLVEVRHTLRQIVNVKGD
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgcacaagatcaccccgaagctcctcagctgggcttcgatcctcgagcagggcacccgc
gagcaggcgatgacgacggcccggatgccgttcatccatccccacctcgcgctgatgccc
gacgcccacctgggccttggcgcgaccgtgggctcggtcatcccgaccctcggcgcgatc
atcccggccgcggtcggcgtcgacatcggctgcggcatgatcgcgatgcgcacgcggctc
accaccgacgagctgccggccgaccggcgaccgctgcgggaggcgatcgagcgggccgtc
ccgctctccgccggcgccgccaacaagacgatcagccgcccgcacacggagcggcggctc
gacgagctgacggccgccgccgaccaggcgggcttcgcgccgggccgctacgcgtcgcgc
tgggacctgcagctcggcacgctcggctcgggcaaccacttcatcgaggtcaccgtcgac
gaggagcagcgggtctggctcttcctgcactcgggctcgcggggcgtgggcaacaagatc
gcgcagcaccacatcaaggtcgctcgcgagctgtgcgagaagtggtggatcaagctcccc
gacaaggacctggcctacctcgcggagggcaccgacgagttctgggcctacatccgggag
atgcggtgggcgcagcgctacgcgctgctcaaccgtgaggagatgatggaccgggtggtc
cggcagttcgcggagtgggtcggtctcggctcggccgacgagctcgagcgggtcgaggag
atcaactgccaccacaactacaccgagcaggagacccacttcggccggaaggtgtggctc
tcgcggaagggcgcgatcaacgccgagcgcggccggccgggcctcatcccgggctcgatg
ggcaccgcgtcgtacgtcgtgagcgggctcggcaacccggtggcactgcactcggcgccg
cacggcgccgggcgggagtactcccggtccaaggcccggcggaccttcacccacgagcag
ctgcgtgaggcgatggcgggcatcgagtaccgggacaccgacgcgttcatcgacgagatc
cccgcggcgtacaaggacatcgaccgggtgatggccgacgccgccgacctcgtcgaggtc
cggcacacgctgcgccagatcgtgaacgtgaagggcgactga

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