Pimelobacter simplex: KR76_06190
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Entry
KR76_06190 CDS
T03528
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
psim
Pimelobacter simplex
Pathway
psim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KR76_06190
09124 Replication and repair
03420 Nucleotide excision repair
KR76_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psim03021
]
KR76_06190
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_06190
Enzymes [BR:
psim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR76_06190
Transcription machinery [BR:
psim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KR76_06190
DNA repair and recombination proteins [BR:
psim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KR76_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AIY16452
UniProt:
A0A0A1DIJ2
LinkDB
All DBs
Position
complement(1235780..1237420)
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AA seq
546 aa
AA seq
DB search
MQSDKSLLLEVDHPQAAECRKAIAPFAELERSPEHIHTYRLTPLGLWNARAAGHDAEQVV
DTLLAYSRYPVPHALLVDVAETMARYGRLRLEKHPTHGLVLASSDRPVLEEVLRAKKIAG
MLGSRLDDDTVAVHPSERGNLKQALLKLGWPAEDYAGYVDGEAHAIDLAEDGWTLRDYQR
DAAESFWHGGSGVVVLPCGAGKTLVGAAAMAHARATTLILVTNTVSARQWKDELVRRTSL
TPDEIGEYSGTVKEIRPVTIATYQVITTKRKGVYPHLELFDARDWGLIVYDEVHLLPAPI
FRMTADLQARRRIGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCIEVR
VSLPDASRMTYATAEPEERYRLAACTPEKVGVVRDLVTRHSGQPTLVIGQYLEQLEELAT
ALDAPVITGQTPVKERQRLFDAFRSGEIGLLVVSKVANFSIDLPTAEVAIQVSGSFGSRQ
EEAQRLGRLLRPGDPGPDGERKIAHFYTIVARDTVDAEFAQNRQRFLAEQGYAYRIVDAG
DELAGR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtcggacaagtccctgctcctcgaggtggaccatcctcaggccgccgagtgccgc
aaggcgatcgcgccgttcgccgagctggagcgctcgcccgagcacatccacacctaccgc
ctcacccccctcggtctctggaacgcccgcgctgccggccacgacgccgagcaggtcgtc
gacaccctgctcgcctactcgcgctacccggtgccccacgccctcctcgtcgacgtcgcc
gagacgatggcgcgctacggccggctccggctggagaagcaccccacccacggcctcgtc
ctcgcctcgtccgaccggccggtgctcgaggaggtgctgcgcgccaagaagatcgccggc
atgctcggcagccgtctcgacgacgacaccgtcgccgtgcacccctcggagcgcggcaac
ctcaagcaggccctcctcaagctcggctggccggcagaggactacgccggctacgtcgac
ggcgaggcccacgccatcgacctcgccgaggacggctggacgctgcgcgactaccagcgc
gacgccgccgagtcgttctggcacggcggctccggcgtcgtcgtcctgccctgcggggcg
ggcaagacgctcgtcggtgcggccgccatggcccacgcccgggcgacgaccctgatcctg
gtgaccaacaccgtgagcgcccggcagtggaaggacgagctcgtccgtcgtacctcgttg
acgcccgacgagatcggcgagtactccggcaccgtcaaggagatccgccccgtcaccatc
gcgacctaccaggtcatcacgaccaagcggaagggcgtctacccgcacctcgagctgttc
gacgcccgcgactggggcctcatcgtgtacgacgaggtgcacctcctccctgctccgatc
ttccggatgaccgccgacctccaggcgcgccgccggatcggcctgaccgccacgctcgtc
cgcgaggacgggcgtgagggcgacgtgttctccctcatcggccccaagcggtacgacgcc
ccgtggaaggacatcgaggcgcagggctggatcgcgcccgccgactgcatcgaggtccgg
gtctcgctgcccgacgcctcccggatgacctacgcgaccgccgagcccgaggagcgctac
cgcctcgccgcctgcacccccgagaaggtcggcgtcgtccgcgacctggtcacccgccac
tccggccagccgaccctggtgatcgggcagtacctcgagcagctcgaggagctcgccacc
gcgctggacgcccccgtcatcaccggccagaccccggtcaaggagcgccagcgcctcttc
gacgccttccggtccggcgagatcgggctgctcgtcgtgtcgaaggtcgcgaacttctcc
atcgacctgcccaccgccgaggtggcgatccaggtgtcgggctcgttcggctcccgccag
gaggaggcccagcgcctcggccgcctgctccgtcccggcgaccccgggccggacggcgag
cgcaagatcgcgcacttctacacgatcgtcgcgcgcgacacggtcgacgccgagttcgcc
cagaaccggcagcggttcctcgccgagcaggggtacgcctaccggatcgtcgacgccggg
gacgagctcgccggccgctga
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