Pimelobacter simplex: KR76_09305
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Entry
KR76_09305 CDS
T03528
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA, actinomycete-like
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psim
Pimelobacter simplex
Pathway
psim03420
Nucleotide excision repair
psim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR76_09305
03430 Mismatch repair
KR76_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_09305
Enzymes [BR:
psim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR76_09305
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KR76_09305
MMR (mismatch excision repair)
Other MMR factors
KR76_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AIY16908
UniProt:
A0A0A1DK02
LinkDB
All DBs
Position
1901135..1903210
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AA seq
691 aa
AA seq
DB search
MSESIERLLSALDPEQRKVAETLRGPVRVLAGAGTGKTRAITHRIAHGVQAGVYAPTEVL
AVTFTTRAAGELRQRLRALGAPGVQARTFHSAALRQLRYFWPHVHGTELPVLTESKIPML
AAACRTLGIRAEQALLRDLASEVEWAKVSNVGADDYPRLAPAKGRSVGDQTPEAVGRVMA
AYEQVKRDQGRMDMEDVLLLTAGVLASDERVAAQVRRQYKWFVVDEFQDVSPLQSALLDL
WLGGRDELCVVGDPAQTIYSFAGADATYLKDFPQRYPGTTSIELVRNYRSTPQVVAAANT
LLAGTPSAGVELRSQQPAGSAVRFQGEPDEVAEARGVADRVAKLQRAGTAYGEMAVLFRI
NAQSETFEDALTDRGIPYVVRGAARFFDRREVREAVTRLRGAARSGEADDLPWLEVVKAV
LAGMGWSAEPPTNRGQVRDRWESFQALVDQAGAFAEERGIEASVAAFVDELDRRATEQHA
PTADGVTLATFHAAKGLEWDAVFCCGVQDGTVPIVYAEQGGARPDAVEEERRLLYVGMTR
ARRELMVSWSAARNPGQAPRRQPSRFLVPMLPASQQPQPTRGRTKVARCRECLQPLTSAA
EKKRGRCAHHPVRYDEGLFERLKAWRLETARESGEDGKPLPAYVVFTDATLELIAEHKPT
TMAALAKVNGVGPNKIERYGEAVLALVSEKP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccatcgaacgcctgctctccgcgctcgaccccgagcagcgcaaggtcgcc
gagaccctgcgcggcccggtgcgggtgctggcgggcgcgggcacgggcaagacccgggcg
atcacccatcgcatcgcgcacggcgtccaggcgggggtctacgcgccgaccgaggtgctc
gcggtgaccttcacgacccgcgcggcgggcgagctgcgccagcggctgcgggcgctcggg
gcaccgggggtgcaggcgcgcacgttccacagcgcggcgctgcgccagctgcgctacttc
tggccccacgtgcacggcaccgagctgccggtgctgaccgagtccaagatcccgatgctg
gccgcggcctgccgcacgctgggcatccgggccgagcaggcgctgctgcgcgacctcgcc
tccgaggtcgagtgggccaaggtgagcaacgtcggggccgacgactacccgcggctcgcg
cccgccaagggccgctcggtcggcgaccagacccccgaggcggtgggccgggtgatggcc
gcctacgagcaggtcaagcgcgaccaggggcgcatggacatggaggacgtcctcctcctg
acggccggcgtcctggcgagcgacgagcgggtcgcggcccaggtgcggcgccagtacaag
tggttcgtcgtcgacgagttccaagacgtctccccgctccagtcggcgctgctcgacctg
tggctgggcgggcgcgacgagctgtgcgtggtgggtgacccggcccagacgatctactcg
ttcgcgggcgccgacgcgacctacctcaaggacttcccgcagcgctatcccggcaccacc
tcgatcgagctggtccgcaactaccgctccacgccccaggtcgtggccgcggccaacacg
ctgctggccggcacgccgagcgccggcgtcgagctgcgctcccagcagccggccggctcc
gcggtgcgcttccagggtgagcccgacgaggtcgccgaggcgcggggggtggccgaccgg
gtggccaagctccagcgcgcgggcacggcctacggcgagatggcggtgctcttccggatc
aacgcccagtccgagaccttcgaggacgccctgaccgaccgcggcatcccctacgtcgtc
cgcggcgcggcccgcttcttcgaccggcgcgaggtgcgcgaggcggtcacccggctgcgc
ggcgcggcgcgctccggcgaggccgacgacctgccttggctcgaggtggtcaaggcagtc
ctggccggcatgggctggtcggccgagccgcccaccaaccgggggcaggtgcgcgatcgc
tgggagtccttccaggcgctggtcgaccaggccggggcgttcgccgaggagcgcggcatc
gaggcctcggtggcggcgttcgtcgacgagctcgaccgccgggccaccgagcagcacgcg
ccgaccgccgacggcgtcacgctggcgaccttccacgccgccaagggcctggagtgggac
gcggtgttctgctgcggcgtccaggacggcaccgtcccgatcgtctacgcggagcagggc
ggcgcgcgccccgacgcggtcgaggaggagcgccggctgctctacgtcggcatgacccgg
gcccggcgcgagctgatggtgtcgtggtcagccgcgcgcaacccggggcaggcgccgcgg
cgccagccgtcccgcttcctggtgccgatgctgccggccagccagcagccccagccgacc
cgcgggcggaccaaggtcgcccgctgccgcgagtgcctgcagccgctgacctccgccgcc
gagaagaagcgcgggcgctgcgcccaccacccggtccgctacgacgaggggctcttcgag
cggctcaaggcctggcgtctcgagaccgcgcgcgagtccggcgaggacggcaagccgctg
ccggcctatgtcgtcttcaccgacgccacgctcgagctgatcgccgagcacaagcccacc
acgatggccgcgctcgcgaaggtcaacggggtcggtcccaacaagatcgagcgctatggc
gaggccgtgctggcactggtttcagaaaaaccttga
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