Pimelobacter simplex: KR76_09985
Help
Entry
KR76_09985 CDS
T03528
Name
(GenBank) Fibronectin, type III domain protein
Organism
psim
Pimelobacter simplex
Pathway
psim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KR76_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
fn3
Cadherin_5
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Bact_surface_Ig-like
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
AIY17005
UniProt:
A0A0A1DNR6
LinkDB
All DBs
Position
2049706..2055834
Genome browser
AA seq
2042 aa
AA seq
DB search
MIRRWRRTASATALALLLGTLVVLAFEHDGKPFTEVDLNDGGVWVTNQEKGLVARLNPQI
EELDLGVDSGSTTFDIFQRDTSLYVDDASSERAVKPVDVARAAVLDPTALPTGAVVAQGG
DTFAIVDPGGKAWVRSGEGLRGFTVKAAKPDVTGALSAVVGTDGRAYVLGRDGKVTPVST
DDAGLPVTEDRMKLGSDVGTEPGNVDLTVVGDTPVLYNRSTLELSRPDADPVVVEAADPT
AVALQQPSGESGEVYVATQNGLYSVPLEGGKLDKVSRGDVDGRPAAPVAMTSTRCVYAAW
ADPDSSGNYLRDCADDADDDTAPVPEMEDGAELEFRVNRDVVVLNDTRTGDSWLVQDPGK
AKIDNWPAVDPNNQNRSKIKETTDEVPDQENRPPVPEDDDLGARRGRTTVFPVVALNDHD
PDGDIISIAKVTQQSGEPMEVRIVGGGTQLQVNVPADAEGKAVFRYAVTDGKVNDLAYAE
LRVQVRTDEQHSRPKLMPDREPVLTVARGATSDYYLLADYYDPDGDDLTLREATARGGDV
EFRPDGTITFTDDGSGSKVSEIQYTIEDGQDTITDKLRVQVVGDTAPPELVPDLASGVAD
TQVVVQPLTNDRNPEGNDLKLKGVKVVGDDTGTSITRDLDNGTFTFQATKARSYYLEYTA
YNSSATRSSFIRLDIESPPKDNRAPIAVRDKAVITPGGSAQVDLLLNDFDPDGDVLVVKR
VGRPSVAGVKVSVVDKRLAVVSTTTDIVGQQATVEYVVSDGRSSTVGQLVIAQREASQVN
RHPVANKDQVTVRAGAVTTIPVLANDSDPDGGKPRLFQSDLDAGDLNVWVAGDVLRLRAP
DKPGTYSVIYGVRDTDGLKATAEVSIFVIPDSAKNNHPPLPEPIIDRVISGRPKVISVDL
AGADPDGDSVAFRSILTAPKLGRVLDTGVDWLRYEAFEDKAGTDFFQVQVQDKYGETGVA
EVRVGVVPEEAENQPPVALDDNVLVQPNRTISYNVLTNDVDPDDDPLRIAELNSTTKAKH
RNGFVELDVGDAPDAGAAATNIGYTIEDAAGAEGHAVLKVSASHDAPFYAPIARDDVADL
GDIIGRDPGAWVDIPVLENDLDFDGPKVELKVTDCDAGSRGECEVAKGDSTVRVKLTADD
QVVLYRLDDSDDESSDTFGVIYVTGTANVPPQLTTAKDKIPVKAVSGERVVLDLEDLVVT
RAGREPRIVPDRTPTAVNGVVGAVEGSPTSLSFVSDRGHVGPASVTVSVSDGRTTGEDAG
LTSLLTIPIDVRPSGNVAPEMRDAAVDVGTEGDAAQVDLAGLTRDANEDDLDTMAYSVKS
AEAGLTASIPSGESILSIEASGGAKDGDTLKVAVVADDGHGGTTEATVTAHIVDSDRPRL
EIPVISVTTKKGEVRSVDLADYAVNPYPGEPIKASNARIEGSGRVDDLETDGSSVSFRPV
GSGTSTIKVTVSDASDDKKRDVTARINVVVLDVPAAPPRPALSSVEASSAVLSWREPDAN
GAPIEQYEVSGSHGFRQICTGPTCRLDDLTPGETYTFTVKAENSVGWSEASPPSEAITPN
KAPDLMSPPTIVVEPKPTGSRMDRQLTVRWTPPANEGSPITSYEIKEAGSGRTWTATGGQ
TSHLITGLDNGTSYAFEIRAVNDVEPRRQFSGASQSVAPFGVPVRSGAPPQLTASEDSPY
TNEPWVRIDWSRWSVSQSNGNAVSAYVITCDGCSRSTYTVGAGTSSKTFGAGDGIRKGQT
VTFTVAATNDAGTSDRSPSVSGRPWTKAGPVRGLREVGSSPSDRTAMIGWDAPADDGGLP
IRYYVVQTGSSGSVTVPAAPGGGGQAITFADNGTHSIRVWAVTFNGDRSVEGQADSLDGI
LTWGKPFPPDDTSKTSTEYYSVDLRLQAGAANGKPVTGVQFSTDGGASWNDRRSGESWST
AVEQGGSTARIMVRTRSSATGDREFSDPITITGTSKEKYLAISVSCNVLGRCAIGVNADG
FINQPRDAVVSLNGLQPYGDSCGSFTQSVSGRLSYTAGGNGCRVTGDAKPSVTLDGVSRT
AP
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgccgctggcgccgcacggcatccgcgactgcgctcgcactgctgctcggcacg
ctcgtcgtcctcgccttcgagcacgacggcaagccgttcaccgaggtcgacctcaacgac
ggcggcgtgtgggtgaccaaccaggagaagggtctggtcgcccgcctcaacccgcagatc
gaggagctcgacctcggcgtcgactcgggcagcacgaccttcgacatcttccagcgcgac
accagcctgtacgtcgacgacgcgtcctccgagcgtgccgtcaaaccggtcgacgtcgcg
cgtgccgcggtgctcgacccgaccgcgctgccgaccggcgccgtggtcgcccagggcggc
gacacgttcgcgatcgtcgaccccggcggcaaggcgtgggtgcgctccggcgagggcctg
cgcggcttcaccgtgaaggccgcgaagcccgacgtcaccggcgcgctctccgccgtcgtc
ggcaccgacggccgcgcctacgtgctcggccgcgacggcaaggtcacgccggtctcgacc
gacgacgccggcctgcccgtcaccgaggaccggatgaagctcggcagcgacgtcggcacc
gagcccggcaacgtcgacctgaccgtcgtcggcgacacgcccgtcctctacaaccgctcc
acgctcgagctcagccgccccgacgccgacccggtcgtcgtcgaggccgccgaccccacg
gccgtcgcgctgcagcagccgtcgggggagtccggtgaggtctacgtcgcgacccagaac
gggctctactccgtgccgctcgagggtggcaagctcgacaaggtcagccgcggcgacgtc
gacgggcgcccggccgcgccggtcgcgatgaccagcacgcgctgcgtctacgccgcctgg
gccgaccccgactcgagcggcaactacctgcgcgactgcgccgacgacgccgacgacgac
accgccccggtgcccgagatggaggacggcgccgagctggagttccgcgtcaaccgcgac
gtcgtcgtcctcaacgacacccgcaccggcgacagctggctggtccaggacccgggcaag
gccaagatcgacaactggccggccgtcgacccgaacaaccagaaccggtcgaagatcaag
gagaccaccgacgaggtccccgaccaggagaaccgcccgccggtgcccgaggacgacgac
ctcggcgcccgccgcggccggaccacggtcttcccggtggtcgcgctcaacgaccacgac
cccgacggcgacatcatcagcatcgccaaggtgacccagcagtccggcgagccgatggag
gtgcggatcgtcggtggcggcacgcagctccaggtcaacgtcccggcggacgccgagggc
aaggcggtcttccgctacgccgtcaccgacggcaaggtcaacgacctggcctacgccgag
ctgcgcgtgcaggtgcgcaccgacgagcagcacagccggcccaagctgatgcccgaccgc
gagccggtgctcaccgtcgcgcgcggggcgacgtccgactactacctgctcgccgactac
tacgaccccgacggcgacgacctcaccctgcgcgaggcgacggcgcgcggcggcgacgtc
gagttccgccccgacggcaccatcaccttcaccgacgacggctctggctcgaaggtctcc
gagatccagtacacgatcgaggacggccaggacacgatcaccgacaagctccgggtccag
gtggtcggcgacaccgcgccgcccgagctggtgcccgacctggcctccggcgtcgcggac
acccaggtcgtcgtccagccgctgaccaacgaccgcaaccccgagggcaacgacctcaag
ctcaagggcgtcaaggtcgtcggcgacgacaccggcacgtcgatcacccgggacctcgac
aacggcacgttcaccttccaggcgaccaaggcgcgcagctactacctggagtacacggcc
tacaactcgtcggccacccgctcgtcgttcatccggctcgacatcgagtcgccgcccaag
gacaaccgggcccccatcgcggtgcgcgacaaggcggtcatcaccccgggcggctccgcc
caggtcgacctgctgctcaacgacttcgaccccgacggcgacgtcctcgtcgtcaagcgg
gtcggtcggccgtcggtggccggggtcaaggtctcggtcgtcgacaagcggctggccgtg
gtcagcacgaccaccgacatcgtgggccagcaggccacggtcgagtacgtcgtgtccgac
ggccgcagctcgacggtgggtcagctcgtgatcgcccagcgcgaggcctcccaggtcaac
cggcaccccgtcgccaacaaggaccaggtcaccgtgcgggccggggcggtcaccacgatc
ccggtgctggccaacgactccgaccccgacggcggcaagccgcggctgttccagtccgac
ctcgacgccggcgacctcaacgtctgggtggccggcgacgtcctgcgcctgcgcgccccc
gacaagccgggcacctactcggtgatctacggcgtgcgcgacaccgacggcctcaaggcg
accgccgaggtgagcatcttcgtcatcccggactccgccaagaacaaccacccaccgctg
cccgagccgatcatcgaccgggtgatcagcggccggcccaaggtgatctcggtcgacctc
gccggtgccgaccccgacggcgactcggtcgccttccgcagcatcctgaccgcgcccaag
ctcggccgggtgctcgacaccggcgtcgactggctccgctacgaggcgttcgaggacaag
gccggcaccgacttcttccaggtccaggtccaggacaagtacggcgagaccggcgtcgcc
gaggtgcgggtcggggtcgttcccgaggaggccgagaaccagccgccggtcgcgctcgac
gacaacgtgctggtccagcccaaccggaccatctcctacaacgtgctcaccaacgacgtc
gaccccgacgacgacccgctgcgcatcgccgagctcaacagcacgacgaaggccaagcac
cgcaacggcttcgtcgagctcgacgtcggcgacgcgcccgacgccggcgccgccgcgacc
aacatcggctacacgatcgaggacgccgccggcgccgagggccacgcggtgctcaaggtc
tccgcgagccacgacgcgcccttctacgccccgatcgcgcgcgacgacgtggccgacctc
ggcgacatcatcgggcgcgacccgggcgcctgggtcgacatcccggtgctcgagaacgac
ctcgacttcgacggtcccaaggtcgagctgaaggtcaccgactgcgacgccggcagccgc
ggcgagtgcgaggtcgcgaagggcgactcgacggtgcgggtcaagctcaccgccgacgac
caggtggtcctctaccgcctcgacgacagcgacgacgagtcgtccgacaccttcggcgtc
atctacgtgaccggcaccgccaacgtgccgccgcagctgaccaccgcgaaggacaagatc
ccggtcaaggcggtgtcgggggagcgggtcgtgctcgacctcgaggacctcgtcgtcacc
cgcgccggccgcgagccgcggatcgtcccggaccgcacgccgaccgccgtcaacggcgtc
gtcggcgcggtcgagggaagcccgacctcgctgtcgttcgtctccgaccgcggccacgtc
ggcccggcctcggtcacggtctcggtcagcgacggccgcaccaccggcgaggacgccggg
ctgacgtcgctgctgaccatcccgatcgacgtccggcccagcggcaacgtcgcgcccgag
atgcgcgacgccgcggtcgacgtcggcaccgagggcgacgccgcccaggtcgacctcgcc
gggctcacccgcgacgccaacgaggacgacctcgacaccatggcctactcggtgaagtcg
gccgaggccgggctcaccgcgagcatcccgtcgggcgagagcatcctgtcgatcgaggcg
agcggcggcgccaaggacggcgacacgctcaaggtcgcggtcgtggccgacgacggtcac
ggcggcaccaccgaggccaccgtcaccgcgcacatcgtcgacagcgaccgcccgcgcctc
gagatcccggtgatcagcgtgaccaccaagaagggcgaggtccgctccgtcgacctcgcg
gactacgcggtcaacccctaccccggtgagccgatcaaggcgagcaacgcccggatcgag
ggctccggccgggtcgacgacctcgagaccgacggctcgagcgtctcgttccgcccggtc
gggtcgggcacctcgacgatcaaggtcaccgtctccgacgcctccgacgacaagaagcgc
gacgtcaccgcgcggatcaacgtggtcgtcctcgacgtgcccgcggcgccgccccggccg
gccctgtcgtcggtcgaggcgtcctcggcggtgctgtcctggcgcgagccggacgccaac
ggcgcgccgatcgagcagtacgaggtctcgggctcgcacggcttccggcagatctgcacg
ggccccacgtgccggctcgacgacctcaccccgggcgagacctacacgttcaccgtcaag
gcggagaactcggtcggctggagcgaggcgagcccgccgtccgaggcgatcacccccaac
aaggcgcccgacctgatgtcgcccccgacgatcgtcgtcgagcccaagcccaccggcagc
cggatggaccgccagctcaccgtgcgctggaccccgccggccaacgagggctcgcccatc
acgtcgtacgagatcaaggaggcgggcagcgggcgcacctggaccgctaccggcggccag
acctcgcacctcatcaccggcctcgacaacgggacgtcgtacgccttcgagatccgggcg
gtcaacgacgtcgagccgcgccggcagttctccggcgcctcgcagtcggtcgcgccgttc
ggcgtcccggtgcgctccggcgcgccgccgcagctgaccgccagcgaggacagcccctac
accaacgagccgtgggtgcggatcgactggtcgcgctggtcggtctcgcagagcaacggc
aacgcggtctccgcttacgtcatcacctgcgacggctgcagccgctcgacctacaccgtg
ggggcggggacgtcgtccaagacgttcggtgccggcgacggcatccgcaagggccagacg
gtgaccttcacggtcgcggcgaccaacgacgccggcaccagcgaccgcagcccgagcgtg
tcgggccggccgtggaccaaggcgggcccggtccgcgggctgcgcgaggtgggcagctcg
ccgtccgaccggaccgcgatgatcggctgggacgcgccggccgacgacggcggcctgccg
atccgctactacgtggtgcagaccgggtcgtccggcagcgtcaccgttcccgccgcgccc
ggtggcgggggccaggccatcacctttgccgacaacggcacgcactccatccgggtctgg
gcggtcaccttcaacggagaccggtccgtcgagggccaggcggactcgctcgacgggatc
ctcacctggggcaagccgttcccacccgacgacacctccaagacgagcacggagtactac
tcggtcgacctccggctccaggcgggagcggccaacggcaagccggtcaccggcgtgcag
ttcagcaccgacggcggcgcgagctggaacgaccgccgctcgggcgagtcctggtccacc
gcggtcgagcagggcggcagcaccgcccggatcatggtccggacccggtcgtcggcgacc
ggggaccgcgagttcagcgacccgatcacgatcacgggcacctccaaggagaagtacctg
gcgatcagcgtgtcgtgcaacgtcctgggccgctgcgcgatcggcgtcaacgccgacggc
ttcatcaaccagccgcgcgacgccgtcgtgtcgctcaacggcctgcagccctacggcgac
tcctgcggcagcttcacgcagtcggtctccggcaggctcagctacaccgccggcggcaac
ggctgccgcgtcaccggcgacgccaagccctcggtcacgctcgacggcgtctcccgcacc
gccccctga
DBGET
integrated database retrieval system
