Pimelobacter simplex: KR76_14120
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Entry
KR76_14120 CDS
T03528
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
psim
Pimelobacter simplex
Pathway
psim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR76_14120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_14120
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KR76_14120
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KR76_14120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_23
AAA_25
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
ATPase
cobW
ExoX-like_C
Septin
Phage_zn_bind_8
Motif
Other DBs
NCBI-ProteinID:
AIY17604
UniProt:
A0A0A1DJV1
LinkDB
All DBs
Position
complement(2885530..2888535)
Genome browser
AA seq
1001 aa
AA seq
DB search
MTDQLIIRGAREHNLKDVSIDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEVYDYLRLLYARAGRAH
CPTCGAPIEQQTPQQIVDRMLELDEGTRFQVLAPVVRGRKGEYVELFKQLQTQGFSRARV
DGETHNLDSPPTLDKKLKHTIEVVVDRLAVKASAKRRLTDSVETALGLAGGLVVFDLVDA
GQELKFSEKMACPNDHPIETDDLEPRSFSFNSPFGACPSCSGLGTRMEVDPELVVPDPTA
TLAEGALQPWSHAHVADYFGRLLVALGDELGFDVDTPWEQLTTRAQRAILDGHATKVHVV
TRNRYGRERSYYADFEGVRKYVERRHREAESDTSRERFEGFMREVPCPVCSGSRLKPVSM
AVTLGAKDKGGKNIAEVCALPINETAAYLADLDLSARERQIGERVLKEIQERLNFLLDVG
LDYLSLDRPSGSLSGGEAQRIRLATQIGAGLVGVLYVLDEPSIGLHQRDNQKLIETLVRL
KDLGNTLIVVEHDEDTIRVADWIVDIGPGAGEHGGQVVHSGTVKELLEHPDSMTGQYLSG
RREIPVPAIRRPRTVGRELKVLGAREHNLKNVDVAFPLGVFTAVTGVSGSGKSTLVNDIL
YTSLAKQIYNARTIPGRHQKITGLEHVDKVIHVDQSPIGRTPRSNPATYTGVFDHVRKLF
AQTPEAKMRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCHGARYNRET
LEVHYKGKTIAEVLDMPIEEAQDFFAAVPAIARHMTTLTEVGLGYVRLGQPATTLSGGEA
QRVKLAAELQKRSTGRTVYVLDEPTTGLHFEDIRKLLGVLSGLVDKGNTVLVIEHNLDVI
KTADWIIDMGPEGGSRGGTVVAEGTPEEIAAVAESHTGHFLRPLLDGRGAAQPGAPKRAP
KAAVDAKKTPAAKKAAAKKTAARKVAAVKKSTTGTARKRKA
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcagctgatcatccgcggcgcccgtgagcacaacctcaaggacgtctcgatc
gacctcccgcgcgactcgctcatcgtcttcacgggcctgtccgggtcgggcaagtcgagc
ctggcgttcgacacgatcttcgccgagggccagcgccgctacgtcgagtcgctctcggcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgaggggctc
tcgccggcggtctcgatcgaccagaagtcgacctccaagaacccgcgctcgacggtcggc
accatcaccgaggtctacgactacctgcggctgctctacgcgcgggccggccgggcgcac
tgccccacctgcggcgcccccatcgagcagcagacgccgcagcagatcgtcgaccggatg
ctcgagctcgacgagggcacccgcttccaggtcctggccccggtcgtgcgcggccgcaag
ggcgagtacgtcgagctgttcaagcagctccagacgcagggcttctcccgggcccgggtc
gacggcgagacgcacaacctcgacagcccgcccacgctcgacaagaagctcaagcacacc
atcgaggtcgtcgtcgaccggctcgccgtcaaggcctccgccaagcgccggctgaccgac
tcggtcgagaccgcgctcggcctggccgggggactggtcgtcttcgacctggtcgacgcc
ggccaggagctgaagttctccgagaagatggcgtgccccaacgaccaccccatcgagacc
gacgacctcgagccgcgctcgttctcgttcaactcgccgttcggcgcctgcccgtcgtgc
tcgggcctgggcacccgcatggaggtcgaccccgagctcgtcgtccccgacccgacggcc
acgctggccgagggcgcgctccagccgtggagccacgcccacgtcgccgactacttcggc
cggctcctcgtcgcgctcggcgacgagctcggcttcgacgtcgacacgccctgggagcag
ctgaccacccgtgcccagcgcgccatcctcgacggccacgccaccaaggtgcacgtcgtc
acccgcaaccgctacggccgcgagcgctcctactacgccgacttcgagggcgtgcgcaag
tacgtcgagcggcgccaccgcgaggccgagagcgacacgagccgcgagcggttcgagggc
ttcatgcgcgaggtcccgtgcccggtctgctccggcagccggctcaagccggtctccatg
gcggtcaccctgggcgccaaggacaagggcggcaagaacatcgccgaggtctgcgcgctg
ccgatcaacgagactgcggcctacctggccgacctcgacctgtccgcgcgcgagcgccag
atcggcgagcgggtgctcaaggagatccaggagcggctcaacttcctgctcgacgtcggc
ctcgactacctctccctcgaccggccctcgggctccctgtccggcggcgaggcccagcgg
atccggctggccacccagatcggcgccggcctggtcggcgtcctctacgttctcgacgag
ccgtccatcggcctgcaccagcgcgacaaccagaagctgatcgagaccctggtccggctc
aaggacctcggcaacacgctgatcgtcgtcgagcacgacgaggacaccatccgggtcgcc
gactggatcgtcgacatcggccccggcgccggcgagcacggcggccaggtggtccactcc
ggcaccgtcaaggagctcctcgagcacccggactcgatgaccgggcagtacctctcgggc
cgccgcgagatcccggtgcccgccatccgccgtccccgcacggtcgggcgcgagctcaag
gtgctgggcgcgcgcgagcacaacctcaagaacgtcgacgtcgccttcccgctcggcgtg
ttcaccgcggtcaccggcgtctcgggctcgggcaagtccacgctggtcaacgacatcctc
tacacgtcgctggccaagcagatctacaacgcccgcacgatcccgggccggcaccagaag
atcacgggcctcgagcacgtcgacaaggtgatccacgtcgaccagtcgccgatcggccgc
accccgcgctccaacccggcgacctacacgggcgtcttcgaccacgtccgcaagctgttc
gcgcagacgcccgaggccaagatgcgcggctaccagcagggccggttctcgttcaacgtc
aagggcgggcgctgcgaggcgtgcgccggcgacggcacgatcaagatcgagatgaacttc
ctgcccgacgtctacgtcccgtgcgaggtgtgccacggcgcccgctacaaccgcgagacg
ctcgaggtccactacaagggcaagaccatcgccgaggtcctcgacatgccgatcgaggag
gcgcaggacttcttcgccgccgtccccgcgatcgcccggcacatgacgacgctcaccgag
gtcggcctcggctacgtccggctcggccagccggccacgacgctctccggtggcgaggcg
cagcgcgtcaagctggccgccgagctccagaagcgctcgaccggccgcacggtctacgtc
ctcgacgagccgaccaccggcctccacttcgaggacatccgcaagctgctcggcgtcctc
tcgggtctggtcgacaagggcaacacggtcctggtgatcgagcacaacctcgacgtcatc
aagaccgccgactggatcatcgacatgggccccgagggcggctcccgcggcggcacggtc
gtcgccgagggcacccccgaggagatcgccgcggtcgccgagagccacaccggccacttc
ctgcgccccctgctcgacggtcgcggcgcggcccagccgggcgcgccgaagcgggcgccc
aaggccgccgtcgacgccaagaagacgccggccgccaagaaggccgcggccaagaagacc
gccgcgcgcaaggtggcggcggtcaagaagtcgacgacgggcacggcgcgcaagcggaag
gcctga
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integrated database retrieval system