Pimelobacter simplex: KR76_16065
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Entry
KR76_16065 CDS
T03528
Name
(GenBank) T1SS secreted agglutinin RTX
Organism
psim
Pimelobacter simplex
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CshA_repeat
Big_9
Cadherin_5
SdrD_B
SpaA
CarboxypepD_reg
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
AJR18498
UniProt:
A0A0C5WYV4
LinkDB
All DBs
Position
complement(3258530..3264562)
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AA seq
2010 aa
AA seq
DB search
MSRPSWRRLPALLAAALLAISGVALVAEAPIASAAAQNGYVFNDAWQLQNPGSTRTNDSA
ESDATNSATSSLPTSTGAIGITARFAPGGDQRAGTNYLTNGTNQSGYGGSAGMFAGAPTP
GNLPALGVLTGASTCGGAQGTAAHQNFAGSCEVGTLTLEFSKPVTDPVLDISGLGGFVQR
NSNGRARGSFNATIWEIETPGVSFAAPSAGRTNLAVGSTTLGPGVYNTFTRCDQDGHQEQ
SGNIASPRMTTAGCGSVVLQGTFTSVTFRLDSHVTPYSTFPASTHGTGSLYSQNINGDQY
ADGVNGYNVNLTEQAVLPGRATGSRNSDMQRVSLRLPTPGVIGDRVWSDTNGDGIQDEGE
PGLAGATVELLDGDGNPVTDANGNPITATTGADGAYRFTDLPLGDYRVRFTAPDGREFSP
TGAGDPASDSDAGEGGLSGVITLTSEQPEDLTVDAGVVPPRPTASPDTSSGPQGARQTVD
PLVNDDGDGQGSTLDPSTLTLLDAAGEPADAVTVYDAEGNEIGTYTIDRSDPDRPLIAFQ
PVPTFTGEAPPVDYRIADSNGRTAESTYTPTVTPVTPTAQPDETSGPQGQAQSVDPFVND
APGDDSAPLVRSSLTLLDGPDGDPVDAVTVRDDEGNEIGTYTIDRSDPDNPRIVFQPVPS
FTGTAPAVDYRIEDANGTPATSTYTPTIEPVTPQANPDETSGPQGAEQSVDPFTNDEAGD
DAVPLDRDSLTLLDDAGNPVDSVTVPGEGTYTVRDGKLVFQPEPGFTGEATPVRYQVADV
NGTTADSTYTPTVTPVAEPDTTSGPQGVPQRVDPLANDGTDEVTLDPDTLTLVDADGNPV
DSVTVEGEGTYTIEDGQIVFTPEPDFTGEATPVRYQVKDTEGNTVESTYTPTLDPVTPVA
NPDSTSGPQGVPQSIDPFANDEPGDPAVPLDRDSLTLLDGAGNPVSTVSVPGEGVYTVED
GKIVFTPEPDFTGTATPVDYRIADVNGTTADSTYTPTLNPVSPTANPDVSSGPQGAEQSV
DPFANDEPGDEDVPLDPESLTLLDADGNPVDEVVVPGEGTYTVRDGKLVFQPEPGFSGEA
TPVRYQVADVNGTTADSTYTPTVGAVANPDVTSGPQGVPQRVDPLANDGTDEVSLDPDTL
TLVDADGNPVDSVTVEGQGVYTIEDGQIVFTPEPDFVGEATPVRYQVKDTEGNTVESTYT
PTLNPVTPVANPDTTSGPQGVPQSIDPFANDEPGDDAVPLDPESLTLLDAEGNPTDRVEV
PGEGVYTVEDGKIVFTPEPDFTGTATPVDYRIADVNGTTADSTYTPTLNPVTPVANPDTT
SGPQGVPQSTDPFANDEPGDDAVPLDPESLTLLDAEGNPVDSVTIDGEGVYTVEGGKIVF
TPEPQFTGTATPVDYRIADVNGTTADSTYTPTIDPVAPVANPDTTSGPQGAKQTVDPFAN
DEPGDDNVPLDRDSLTLLDAEGNPVDSVTIPGEGTYTVEGDKIVFTPEPQFTGEATPVDY
RIADVNGTTADSTYTPTVTPVAQPDTTSGPQGVPQSVDPLANDSAEGVELDPDTLTLVDA
DGNPVDELVVPGEGSYTIEDGKIVFTPEPQFTGEGTPVRYQVKDSEGNTVESTYTPTVTP
VTPTANPDTTSGPQGVPQSTDPFANDEAGDPAVPLDPDSLTLLDAEGNPVESVTIPGEGT
YTVADGRIVFTPEPQFTGTATPVDYRIADVNGTTAESTYTPTIDPVTPVANPDKTSGPQG
VPQSIDPLANDEAGDPAVPLDPDSLTLLDAEGNPADSVTVPGEGTYTIEDGKIVFTPEPQ
FTGTATPVDYRIADVNGTTARSTYTPTIDPVTPTASPDKTSGPKGKPQSIDPLANDKAGD
PAVPLDPSSLTLLDKDGNPVDTVTVPGEGVYTIEDGKIVFTPEPDFTGTATPVRYRVADV
NGTTTESTYTPTVLPDAPVPGEPGPGEPSKPGKPGKSAKPGTPGTPGTTAKNGDLPATGS
EVSPALLGLGVAALVGGLLFTWVGRRRNRA
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtccgtcctggcgacgcctaccggcactgctcgccgccgccctcctggcgatc
tcgggggtcgccctcgtcgcggaggcgccgatcgcgtccgccgcggcgcagaacggctac
gtcttcaacgacgcctggcagctgcagaaccccggttccacccgcaccaacgactcggcc
gagtccgacgcgaccaacagcgcgacctcgtcgctgccgacgtcgaccggcgccatcggg
atcaccgcgcggttcgcccccggcggcgaccagcgggccggaaccaactacctcaccaac
ggcaccaaccagtccggctacggcgggagtgcggggatgttcgccggtgctccgacgccg
ggcaacctgccggcgctcggcgtcctgaccggagcctcgacgtgcggcggcgcgcagggc
accgcggcccaccagaacttcgcaggctcctgcgaggtcggcacgctgaccctggagttc
tccaagccggtcaccgacccggtcctcgacatctcgggtctcggcggcttcgtccagcgc
aacagcaacggccgcgcccgtggttcgttcaacgccaccatctgggagatcgagacgccg
ggcgtctccttcgccgcgccgtccgccggtcgcaccaacctcgccgtcggcagcacgacg
ctggggcccggtgtctacaacaccttcacccgctgcgaccaggacgggcaccaggagcag
tcgggcaacatcgccagcccgcggatgacgaccgccggctgcggctcggtcgtcctgcag
ggaacgttcacctcggtcaccttccggctcgactcccacgtcacgccgtactccaccttc
ccggcgagcacgcacgggaccggctcgctctactcccagaacatcaacggcgaccagtac
gccgacggcgtcaacggctacaacgtcaacctgaccgagcaggccgtgctcccgggccgc
gccaccggcagccgtaactccgacatgcagcgggtctcgctccgcctgcccacccccggc
gtgatcggcgaccgggtctggtccgacaccaacggcgacggcatccaggacgagggcgag
ccgggtctcgccggcgcgaccgtcgagctgctcgacggcgacggcaacccggtgaccgac
gccaacggcaacccgatcaccgcgaccaccggcgccgacggcgcctaccgcttcaccgac
ctgccgctcggcgactaccgggtgcggttcactgcgcccgacggccgggagttctcgccg
accggtgccggcgacccggcctccgactccgacgcgggcgagggcggtctgagcggcgtc
atcacgctgacctccgagcagcccgaggacctcaccgtcgacgcgggcgtggtcccgccc
cggcccacggccagccccgacacctcgtcgggtccgcagggcgcccggcagacggtcgac
ccgctcgtcaacgacgacggcgacggccagggctccaccctcgatccctccacgctgacc
ctgctcgacgctgccggtgagccggccgacgcggtcaccgtctacgacgccgagggcaac
gagatcggcacctacacgatcgaccgctccgaccccgaccggccgctgatcgccttccag
cccgtcccgacgttcaccggcgaggccccgccggtcgactaccggatcgccgacagcaac
ggccgtaccgccgaatcgacgtacaccccgacggtgacgccggtgaccccgacggcgcag
cccgacgagacctccggtccgcagggtcaggcccagtcggtcgacccgttcgtcaacgac
gcgcccggcgacgacagcgctcctctggtccggtcgtcgctgaccctgctcgacggtccc
gacggcgacccggtcgatgcggtcaccgtccgcgacgacgagggcaacgagatcggtacc
tacacgatcgaccgctccgaccccgacaacccgcggatcgtgttccagccggtgccgagc
ttcaccggcaccgcgccggcggtcgactaccggatcgaggacgcgaacggcacgccggcg
acctcgacgtacaccccgaccatcgagccggtgacgccccaggccaaccccgacgagacg
tcgggtccgcagggtgccgagcagtcggtcgacccgttcaccaacgacgaggccggcgac
gacgccgtcccgctcgaccgcgactcgctcacgctgctcgacgacgccggcaacccggtc
gactcggtcaccgtccccggtgagggcacctacacggtgcgcgacggcaagctggtgttc
cagcccgagccgggcttcaccggtgaggcgaccccggtgcgctaccaggtcgcggacgtc
aacgggaccacggcggactcgacctacaccccgaccgtgacgccggtcgcggagcccgac
accacgtccggcccgcagggtgtgccgcagcgggtcgacccgctcgccaacgacggcacc
gacgaggtgactctcgacccggacacgttgaccctggtcgacgcggacggcaacccggtc
gactcggtgaccgtcgagggggaggggacctacacgatcgaggacggccagatcgtcttc
acccccgagcccgacttcaccggtgaggccaccccggtccgctaccaggtcaaggacacc
gaggggaacacggtcgagtcgacctacacccccaccctcgatccggtgaccccggtggcg
aaccccgacagcacgtcgggtccgcagggtgtcccgcagtcgatcgacccgttcgccaac
gacgagcccggcgaccccgcggtcccgctggaccgtgactcgctcacgctgctggacggc
gccggcaacccggtctcgacggtctcggtgccgggggagggtgtctacacggtcgaggac
ggcaagatcgtcttcacccccgagccggacttcaccgggaccgcgacgccggtcgactac
cggatcgccgacgtcaacggcacgaccgccgactcgacgtacaccccgacgctcaacccg
gtgagcccgaccgccaacccggacgtctcctcggggccgcagggtgccgagcagtcggtc
gacccgttcgccaacgacgagccgggtgacgaggacgtgccgctcgatcccgagtcgctg
acgttgctggatgctgacggcaacccggtcgacgaggtggtggtgcccggtgagggcacc
tacacagtgcgcgacggcaagctggtgttccagcccgagcccggcttctcgggcgaggcg
accccggtgcgctaccaggtcgcggacgtcaacgggaccacggcggactcgacgtacacc
ccgacggtgggtgcggtcgccaacccggatgtcacctcggggccgcagggcgtcccgcag
cgggtcgacccgctcgcgaacgacggcaccgacgaggtgagcctggacccggacacgttg
accctggtcgatgccgacggcaacccggtcgactcggtgaccgtcgaggggcagggtgtc
tacacgatcgaggacggccagatcgtcttcacccccgagcccgacttcgtcggtgaggcc
acgccggtgcgctaccaggtcaaggacaccgaggggaacacggtcgagtcgacctacacg
ccgaccctcaacccggtgaccccggtcgcgaacccggacaccacgtcgggtccgcagggt
gtgccgcagtcgatcgacccgttcgccaacgacgagccgggcgacgacgccgtgccgctg
gaccccgagtcgctcacactgctggacgccgagggcaacccgaccgatcgcgtcgaggtg
ccgggcgagggcgtctacacggtcgaggacggcaagatcgtcttcacccccgagccggac
ttcaccggcaccgcgacgccggtcgactaccggatcgccgacgtcaacggcacgaccgcc
gactcgacgtacaccccgacgctcaacccggtcactccggtcgcgaacccggacaccacc
tccggtccgcagggtgtgccgcagtcgacggaccccttcgccaacgacgagccgggcgac
gacgccgtgccgctggaccccgagtcgctgacgctgctcgatgccgagggcaacccggtc
gactcggtgacgatcgacggtgagggcgtctacacggtcgagggcggcaagatcgtgttc
acgccggagccgcagttcaccggcaccgcgacgccggtcgactaccggatcgccgatgtc
aacggcacgaccgccgactcgacgtacacgcccacgatcgaccctgtcgcccccgtcgcg
aacccggacaccacctccggcccgcagggtgcgaagcagacggtcgacccgttcgccaac
gacgagcccggtgacgacaacgtcccgctcgaccgcgactcgctcacgctgctcgacgcc
gagggcaacccggtcgactcggtgacgatccccggcgagggcacctacacggtcgagggc
gacaagatcgtcttcacgccggagccgcagttcaccggtgaggccacgccggtcgactac
cggatcgcggacgtcaacggcacgaccgccgactcgacgtacaccccgaccgtgacaccg
gtggcccagcccgacacgacgtccgggccgcagggtgtgccgcagtcggtcgacccgctc
gccaacgacagcgccgagggtgtcgagctggaccccgacacgctgaccctggtcgacgcg
gacggcaacccggtcgacgagctggtggtgccgggcgagggcagctacacgatcgaggac
ggcaagatcgtcttcacgcccgagccgcagttcaccggtgaaggaacgccggtgcgctac
caggtcaaggactccgaggggaacaccgtcgagtcgacgtacacgccgacggtgacgccc
gtgacgccgacggcgaacccggacaccacgtccggtccgcagggtgtgccgcagtcgacg
gacccgttcgccaacgacgaggcgggcgacccggcggtgccgctcgaccccgattcactg
acgttgctggatgccgagggcaacccggtcgagtcggtgacgatccccggtgagggcacc
tacacggtcgcggacggcaggatcgtgttcacgccggagccgcagttcaccggcaccgcg
acgccggtcgactaccggatcgcggacgtcaacggcacgacggccgagtcgacgtacacg
cccacgatcgacccggtcaccccggtcgcgaacccggacaagacgtcgggtccgcagggt
gtcccgcagtcgatcgacccgctggccaacgacgaggccggcgacccggcggtcccgctc
gaccccgattcgctcacgctgctcgatgccgagggcaacccggccgactcggtcaccgtt
cccggtgagggcacctacacgatcgaggacggcaagatcgtgttcacccccgagccgcag
ttcaccggcaccgcgacgccggtcgactaccggatcgccgacgtcaacgggaccaccgcg
cggtcgacgtacacgcccacgatcgatccggtcacgcccaccgccagcccggacaagacg
tccggcccgaagggcaagccgcagtcgatcgacccgctcgccaacgacaaggccggcgac
cccgccgtcccgctcgacccgagctcgctcacgctgctcgacaaggacggcaacccggtc
gacaccgtgaccgttcccggcgagggcgtctacacgatcgaggacggcaagatcgtcttc
acccccgagccggacttcaccggcaccgcgacgccggtccgctaccgggtcgcggacgtg
aacgggacgaccaccgagtcgacgtacacgccgacggtgctgccggacgcccccgtgccc
ggcgagccggggccgggcgagcccagcaagcccgggaagcccgggaagtcggccaagccc
ggcacgccggggacgccggggacgacggccaagaacggcgacttgcccgccaccggctcc
gaggtctcgcccgccctgctcgggctcggcgtggcggccctggtcggcggcctcctcttc
acctgggtcgggcgccgcaggaaccgcgcatga
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