Pimelobacter simplex: KR76_16535
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Entry
KR76_16535 CDS
T03528
Name
(GenBank) Topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psim
Pimelobacter simplex
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psim03032
]
KR76_16535
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_16535
Enzymes [BR:
psim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KR76_16535
DNA replication proteins [BR:
psim03032
]
Prokaryotic type
DNA Topoisomerases
KR76_16535
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KR76_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ThiS
Motif
Other DBs
NCBI-ProteinID:
AIY17967
UniProt:
A0A0A1DMY8
LinkDB
All DBs
Position
3372642..3375170
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AA seq
842 aa
AA seq
DB search
MARRTQQDPLPEDFEEHILDTDIRDEMQSSFLEYAYSVIYSRALPDARDGLKPVQRRILY
TMNDMGLRPDRGHVKSARVVGEVMGRLHPHGDGAIYDALVRTAQSWSLRLPMVDGHGNFG
SPDDPPAAMRYTECRMAPPALAMTESIDEDTVDFRPNYDSREYEPSVLPSAIPNLVVNGT
TGIAVGMATNMAPHNLVEVVQALRHLIQHPKTDIEGLMRFIPGPDLPTGGKIVGLDGIRD
AYETGRGVFKMRATARVETIGRRKGIVVTELPYGTGTEKIVERIKILVQSKKLQGIADIK
DLTDRENGLRLVIEVKNGFVPEALLEQLYKLTPLEDSFGINNVALVDGQPRTMGLKEMLD
VFLQHRYEVVRRRSQFRRNKKAARLHLVDGMLLALLDIDEVIQVIRTSDNAAAAKERLMS
VFELSEIQAEYILGMELRRLTKFSRLELEKEQDELRKEIAELDAILADEALLKKLVSSEL
AEVAKTFGTPRRTVLLESAGTTAVAAAAAPLEVADDPCFALLSATGLLARTTSADEIGTG
GGRANHDVVVSAVRTSARADLGVLTSAGRLLRLAVLDLPAIPPSANEPNLQGGLPLSEVL
ELAKGERALALTTLTTDGPGLALGTRQGVVKRVNPEVLNKDEWEVISLKDGDEVVGAVQL
TTGSEELCFVTSDAQLLHYPADGVRPQGRSGGGMAGIRVTDKERVVWFGVLDLNAPGGVV
LVTASGSATALPGTEPGSVKVTDFWEYPAKGRATGGVRCHRFLKGEDTLVFAWAGPAPAR
ATAASGAPVDLPEATGRRDGSGLPGSQPIVAVAGPLSVALGAAPSGGSSADPAPPSSGDV
SG
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcgtacccagcaggatcccctcccggaggacttcgaggagcacatcctcgac
accgacatccgcgacgagatgcagtcgtccttcctggagtacgcgtactcggtgatctac
tcccgcgcgctgcccgacgcgcgcgacggtctcaagccggtccagcggcgcatcctctac
acgatgaacgacatgggcctgcggcccgaccgcgggcacgtgaagtcggcgcgcgtcgtc
ggtgaggtcatgggccggctgcacccgcatggtgacggcgcgatctacgacgccctcgtg
cggacggcgcagtcgtggtcgctgcggctgccgatggtcgacggccacggcaacttcggc
tcgcccgacgacccgccggcggccatgcgctacaccgagtgccggatggcgccgcccgcg
ctggcgatgaccgagtcgatcgacgaggacaccgtcgacttccggcccaactacgacagc
cgcgagtacgagccgtcggtgctgccgtcggccatccccaacctcgtcgtcaacgggacg
acgggcatcgcggtcggcatggcgacgaacatggcgccgcacaacctggtcgaggtggtc
caggcgctgcgccacctcatccagcaccccaagaccgacatcgaggggctgatgaggttc
atcccgggccccgacctgccgacgggcggcaagatcgtcggcctcgacggcatccgcgac
gcctacgagaccggccgcggcgtcttcaagatgcgcgcgaccgcccgggtcgagacgatc
ggacgccgcaagggcatcgtcgtcaccgagctcccctacggcacgggcaccgagaagatc
gtcgagcggatcaagatcctggtccagtccaagaagctccagggcatcgccgacatcaag
gacctcaccgaccgcgagaacggcctgcgcctggtgatcgaggtcaagaacggcttcgtc
cccgaggccctgctcgagcagctctacaagctgacgccgctcgaggactccttcggcatc
aacaacgtcgccctggtcgacggccagccgcgcacgatgggcctcaaggagatgctcgac
gtcttcctccagcaccgctacgaggtcgtccggcgccgctcgcagttccgccgcaacaag
aaggccgcccggctgcacctggtcgacggcatgctcctcgcgctgctcgacatcgacgag
gtcatccaggtcatccgcaccagcgacaacgccgcggccgccaaggagcggctgatgagc
gtcttcgagctctccgagatccaggccgagtacatcctcggcatggagctgcgccggctc
accaagttctcccggctcgagctcgagaaggagcaggacgagctccgcaaggagatcgcc
gagctcgacgccatcctcgccgacgaggcgctgctcaagaagctcgtctcctccgagctg
gccgaggtcgccaagaccttcggtacgccgcggcgcaccgtcctgctcgagtcggccggc
accacggcggtcgccgcggccgccgcgcccctcgaggttgccgacgacccgtgcttcgcg
ctgctgtccgcgaccggcctgctcgcccggacgacgtccgccgacgagatcggcaccggc
ggcggccgcgccaaccacgacgtcgtcgtctcggcggtccgcacctcggcgcgcgccgac
ctcggcgtgctgacctcggccgggcggctgctgcggctcgccgtcctcgacctgccggcg
atcccgccctcggccaacgagcccaacctccagggcggcctgccgctgagcgaggtcctc
gagctggccaagggcgagcgcgcgctcgcgctcaccacgctgaccaccgacggtcccggg
ctcgcgctcggcacccgccagggcgtggtcaagcgggtcaaccccgaggtgctcaacaag
gacgagtgggaggtcatctccctcaaggacggcgacgaggtcgtcggcgcggtccagctg
accaccggctccgaggagctctgcttcgtcacctccgacgcccagctgctccactacccc
gccgacggcgtgcgcccccagggccgctccggcggcggcatggccggcatcagggtgacc
gacaaggagcgggtcgtctggttcggcgtgctcgacctcaacgcgcccggcggcgtggtc
ctggtgaccgcctcgggctcggccacggccctgcccggcaccgagccgggctcggtcaag
gtgaccgacttctgggagtaccccgcgaagggccgggccaccggcggcgtgcgctgccac
cgcttcctcaagggcgaggacacgctcgtcttcgcctgggccgggcccgcgcccgcccgg
gccaccgcggccagcggcgcgccggtcgacctgcccgaggccaccggccgtcgcgacggc
tccggcctgcccggcagccagccgatcgtcgcggtcgccggcccgctgtccgtggccctc
ggcgccgccccgtccggcggctcgtccgcggatcccgcgccgccgtcctcgggcgatgtg
tcagggtga
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