Pimelobacter simplex: KR76_21770
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Entry
KR76_21770 CDS
T03528
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psim
Pimelobacter simplex
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psim03016
]
KR76_21770
Enzymes [BR:
psim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KR76_21770
Transfer RNA biogenesis [BR:
psim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KR76_21770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
PT
Motif
Other DBs
NCBI-ProteinID:
AJR18678
UniProt:
A0A0C5WZA5
LinkDB
All DBs
Position
4412031..4413398
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AA seq
455 aa
AA seq
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MADESTDQPSASPEAAPVELLTLSEGLPPVIDTPEALAAYCTALAAGSGPVAIDAERASG
YRYSNRAYLIQIKREGAGIGLIDPIAFPDLAPLAEAIGDNEWILHAATQDLPCLAEVGLY
PTALFDTELAGRLLNYPRVGLATLVEVLLERHLRKEHSAVDWSTRPLPDPWLEYAALDVE
VLVELRDLLSRQLDEAGKADWARQEFEHLRGFQPTVRVDAWRRTSGLHKVRGRRTLGAVR
ALWEARDRIARERDVTPGRLIPDAAIVAAATAMPTSRGALLSTQGFHGRGASRYANEWLA
ALRTAAELPEDELPTRVSHGDGPPAPRTWADKDPVAARRLELARAAVATISEGRQVPLEN
LLTPDSLRRVMWAPPSTRDPVELLEAVIDQLHGLGARSWQVGLTAPALSRAILDAEAPKK
KRQSRSASSEAEPDGVPVDEGSPEGDVPSDGASDE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagtccaccgaccagccgagcgcctcccccgaggccgcgccggtcgagctg
ctgaccctctccgagggactgccgcccgtcatcgacacgcccgaggcgctcgcggcgtac
tgcacggcgctcgcggccggctccggcccggtcgcgatcgacgccgagcgggcttccggc
taccgctactccaaccgcgcctacctgatccagatcaagcgcgagggcgcgggcatcggc
ctgatcgaccccatcgcgttccccgacctggcgccgctcgccgaggccatcggcgacaac
gagtggatcctccacgcggccacccaggacctcccctgcctggccgaggtcggcctctac
ccgaccgcgctcttcgacaccgagctcgccgggcgactgctcaactacccgcgcgtcggg
ctcgccaccctggtcgaggtgctgctcgagcggcacctgcgcaaggagcactccgccgtc
gactggtcgacccggccgctgcccgacccgtggctcgagtacgccgcgctcgacgtcgag
gtcctcgtcgagctccgcgacctgctgagccggcagctcgacgaggccggcaaggccgac
tgggcgcgccaggagttcgagcacctgcgcggcttccagccgaccgtccgggtcgacgcg
tggcgccgtacatcagggctgcacaaggtccgcggccgccgtaccctcggcgcggtgcgg
gccctgtgggaggcccgcgaccggatcgcccgcgagcgcgacgtgacgccgggccggctg
atccccgacgccgccatcgtcgccgccgccaccgccatgccgaccagccgcggcgcgctg
ctctcgacccagggcttccacggccggggcgcgtcgcgctacgccaacgagtggctggcc
gcgctgcgcacggccgccgagctgcccgaggacgagctgcccacccgggtctcccacggc
gacggcccgcccgcaccgcggacctgggccgacaaggaccccgtcgccgcccgccggctc
gagctggcgcgcgccgccgtggccacgatctccgaggggcggcaggtcccgctcgagaac
ctgctcacccccgacagcctgcgccgggtgatgtgggcgccgccgagcacccgcgacccc
gtcgagctgctcgaggcggtgatcgaccagctccacggcctcggtgcccgcagctggcag
gtcggcctcaccgcacccgcgctgagccgggcgatcctcgacgccgaggcgccgaagaag
aagcgtcagtcgcgctcggcgtcgtccgaggccgagcccgacggagtgccggtcgacgag
ggatcgcccgagggcgacgtcccgtcagacggcgcctccgacgagtag
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