Pimelobacter simplex: KR76_23475
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Entry
KR76_23475 CDS
T03528
Name
(GenBank) transmembrane serine/threonine-protein kinase D PknD
KO
K20276
large repetitive protein
Organism
psim
Pimelobacter simplex
Pathway
psim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KR76_23475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
NHL
Vgb_lyase
Cadherin_5
SGL
TEN_NHL
Sortase
Cadherin_4
SBBP
CshA_repeat
Mala_s_1-like
Ldl_recept_b
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
AIY18997
UniProt:
A0A0A1DR08
LinkDB
All DBs
Position
4755258..4760366
Genome browser
AA seq
1702 aa
AA seq
DB search
MTAPLALALGLTGTAVVATVGAAPASAAAAPQPCGPLPATGYSPADVATGLNAPAALDVD
ADGRIFVVTRGDGAVRRYTPAGASYTSADLPLSAHTGQGLAVDPAGRVWVSTAGNGRVDR
VAPDGTGYGAEENVVWGLGGPTGLAVDATGRGYVAVGSSRTVVELTPGDPDFSTSVVRPA
AAGTTPYGVAVDAGGATVYSTSTAGDGTSQVVRSDRAGGGWTHTDVAATGLKNAAGITTG
PGGTLYVADSGNDRIVTLTPSGAGYTQAVLPLTGLDDPRDVAVAGDGTLYVADTGNDRVV
RLSARKVTATADTAGTTAGTAVSTDVTANDSATGAGLARPTVAVDPQHGTATVNPNGTIT
YTPDAGFSGTDTYRYAVRDAGDPASVCASATVTVTVGQDNSCGPVGSTGGTARTVVPSGI
DYPSRFAIDGDGNLFVSDGDRGEVVRLSPSGGGFTRTVVATGLPGVAGITVAGDGTLFVT
SWNSGTVSRLTPSGPGYSATTIASGPLLAQPSGIAVAPNGDLYVVANANQLSQGRVVRLD
AASGYTPEVAASGMDFPHQTAVGPDGTAYVVTADNVVRIRHHGSGYSQDVVASGLQDATG
LTADADGNLFVGDTYNDRILRLTPSGAGFTQSVVPGWGDSSPEGVAVRADGVLFVGDGGT
NKIVMLGPARLEAGDDSASVPGDGSVITDVRINDVSNTPLAAPTVTGAPAHGTATVDSDG
TITYRPDAGWSGTDHYTYEVRDRATPAQVCDVATVTITVSPPNGCGPLSSSVYAGRYVGT
HDLANPTGIAVDARRIVFISDPGNEEVIAWGPGSGPATIDSRPGLDPQGIAVDSAGNVFY
ADENDHEIVKLTWSEADNWYTERTVIADDLQRPSGVAVDADGTVYFTERGSSHVERLTPS
GGGYTRTTIAEDLDRPFGIAVDGDGNLFVADRGNDRIVRLTPSGDGYTASVVATSVVAPI
GVAVTPEGDLVIGDAGHDRVLRLVPSGSGYRQEEVLGWGGAATSWVAAFGGAILAVDDDE
TEVVIIPSLRVDAVEDSASTDAPDPVTTDVTANDGSVPEGFPLAKPRIGTPPAHGTATVT
GDGSITYTPAAGFSGEDVYTYTISEDQEEPITCDGAPVTVLVRNGFTPGPGFTVPQNGVH
VSALTDLATTTGRPLSATGVSQVRAPQHGTIDVLPAGPVRYTPTRGYSGPDDYVVRVCDT
SVPQQCTEVTVPITVGVNQVTAVDDESSTTVGVPVITDVTANDLTETGQELAAPTITTPP
AHGTAITSEDGLFYRPDAGFSGVDSFGYRVCDTSAPPTCDTGRVTVTVDNVFTTGAAITT
AQGVPVVTDLADIASVTGSPLDPTAVQQAVQPEHGGAVINGTTGAVTYTPLPGFHGEDSY
TVRVCDTSAPVQCVDALVRVTVTAPEVPAAPVITTSARARVAIPVDRSGAPRSVRLTDQV
RISGFQPGGTATGRATLYGPVDRPSASMCTLANAVGTVFFTPRNGTLTTPPITVREPGYY
TWVVSTTADDDNQAASHSCGQVAETTLVHRPGVGKVRVEAGYSGTDRSVRARRLRPVQVS
VPALGMKARIDTVGTRRGTMLIPGRMARGGWLLGSAAPGEAVGATVIAGHVSDRRDRPGA
FGKLRKARTGQLVEVRGADGVVRTYRITSVRSQPRGRGLTGAPVSTTGAHRLTLVTCTGK
VTYRNGRFHYTRNLVVTAVPIG
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcacccctcgccctcgccctcggcctcaccgggacggcggtcgtcgcgaccgtc
ggggcggcaccggccagcgcggcggccgcaccgcagccctgcggcccgctgccggcgacc
gggtactcccccgccgacgtcgcgaccgggctgaacgcgcctgccgcgctcgacgtcgac
gccgacggccggatcttcgtggtcacccgcggggacggtgccgtccggcggtacacgccg
gccggggcgtcgtacacctcggcggacctgccgctgagcgcgcacaccggccagggcctc
gcggtcgacccggcgggccgggtgtgggtctcgaccgccggcaacggccgggtggaccgg
gtcgctccggacggcaccggctacggcgccgaggagaacgtcgtgtggggcctgggcggt
ccgaccgggctcgcggtcgacgccacgggccggggctacgtcgcggtgggcagcagccgg
acggtcgtcgagctgacaccgggcgaccccgacttcagcacctcggtggtgcgcccggcc
gccgcgggcaccacgccgtacggcgtggcggtcgacgccgggggcgccaccgtctactcc
acctccaccgccggcgacggcacgagccaggtcgtgcggtcggaccgcgcgggcggcggg
tggacccacaccgacgttgcggccacgggcctgaagaacgccgccggcatcacgaccggc
ccgggcggcacgctctacgtcgccgacagcggcaacgaccggatcgtcaccctcacgccg
tccggagcgggctacacccaggccgtgctgccgctcaccggcctcgacgacccccgcgac
gtcgcggtcgccggcgacggcaccctctacgtcgccgacaccgggaacgaccgggtcgtg
cggctctccgcccgcaaggtcaccgccaccgcggacacggccggaacgaccgccgggacc
gcggtgagcaccgacgtcaccgccaacgactccgccaccggtgccggcctcgcccggccg
accgtcgccgtcgacccgcagcacggcaccgcgacggtcaacccgaacggcaccatcacc
tacacgcccgacgcgggcttctcgggcaccgacacctaccgctacgccgtgcgcgacgca
ggcgacccggcctcggtctgcgcgagcgcgaccgtcaccgtgacggtgggccaggacaac
tcctgcggaccggtcggcagcaccggcggcaccgcgcgcaccgtcgtcccgtcggggatc
gactaccccagccggttcgcgatcgacggcgacggcaacctgttcgtctccgacggcgat
cgcggcgaggtcgtccggctgagcccgtcgggcggcgggttcacccgcacggtcgtcgcc
accgggctgcccggggtcgccggcatcaccgtcgccggcgacggcaccctgttcgtcacc
tcgtggaacagcggcacggtgagccggctgaccccgtccgggcccggctactcggccacg
acgatcgcctccggcccgctgctcgcccagccctccgggatcgccgtcgccccgaacggt
gacctctacgtcgtggccaacgccaaccagctcagccagggccgggtggtccggctcgac
gccgcctccggctacaccccggaggtcgccgcctccggcatggacttcccgcaccagacg
gccgtcggccccgacggcaccgcctacgtcgtcaccgcggacaacgtggtgcggatcagg
caccacggctccggctactcgcaggacgtcgtggcgagtgggctccaggacgccaccggt
ctcaccgccgacgccgacggcaacctcttcgtgggcgacacctacaacgaccggatcctc
cggctgaccccgtccggcgccggcttcacgcagtccgtcgtgcccggctggggcgacagc
agccccgagggcgtcgcggtgcgcgccgacggcgtcctcttcgtgggcgacggcggcacc
aacaagatcgtcatgctcggcccggcccggctcgaggccggcgacgacagcgcctccgtc
cccggcgacggctcggtgatcaccgacgtccggatcaacgacgtcagcaacaccccgctg
gccgcgcccaccgtgaccggcgcccccgcgcacggcacggccacggtcgacagcgacggc
acgatcacctaccggcccgacgccggctggtcgggcaccgaccactacacctacgaggtc
cgcgaccgcgcgacccccgcccaggtctgcgacgtcgccacggtgacgatcacggtgagc
ccgcccaacgggtgcggaccgctcagctcgagcgtgtacgccggccgctacgtcgggacg
cacgacctggccaacccgacgggcatcgccgtcgacgcgcgccggatcgtcttcatctcc
gatcccggcaacgaggaggtcatcgcgtggggccccggcagcggcccggccacgatcgac
tcccggcccggcctcgacccccagggcatcgccgtcgacagcgccggcaacgtcttctac
gccgacgagaacgaccacgagatcgtgaagctgacctggtccgaggcggacaactggtac
accgagcgcaccgtgatcgccgacgacctccagcgtccctccggcgtcgcggtcgacgcc
gacggcaccgtctacttcaccgagcgcggcagcagccacgtcgagaggctgaccccgtcg
ggaggcggctacacccgcacgaccatcgcggaggacctcgaccggccgttcggcatcgcc
gtcgacggcgacggcaacctgttcgtcgccgaccgcggcaacgaccggatcgtgcggctg
accccgtcgggtgacggctacaccgcgtcggtggtggccacgagcgtcgtcgcccccatc
ggcgtcgcggtcacccccgagggcgacctggtcatcggcgacgccggccacgaccgggtg
ctgcggctggtcccgtccggatccggctaccggcaggaggaggtcctcggctggggcggt
gcggcgacgtcctgggtcgccgccttcggcggcgccatcctcgccgtcgacgacgacgag
accgaggtcgtgatcatcccgtcgctgcgcgtcgacgcggtcgaggacagcgcgagcacc
gatgcccccgacccggtgaccacggacgtcaccgccaacgacgggtcggttcccgagggc
ttccccctcgcgaagccgaggatcgggacccctcccgcgcacggcaccgcgaccgtgacc
ggcgacggctcgatcacctacacgccggcggccggcttctccggcgaggacgtctacacc
tacacgatctccgaggaccaggaggagccgatcacctgcgacggcgctccggtgacggtg
ctcgtccgcaacgggttcacgcccggccccgggttcaccgtgccccagaacggggtgcac
gtctcggccctcaccgacctcgccacgacgacagggcgtccgctgtcggccaccggggtc
agccaggtgcgggcaccgcagcacggcaccatcgacgtcctcccggccggtccggtgcgc
tacacaccgacccgtggctacagcgggcccgacgactacgtcgtccgggtgtgcgacacc
tccgtcccgcagcagtgcacggaggtcaccgtcccgatcaccgtcggcgtcaaccaggtg
acggcggtcgacgacgagtcgagcacgaccgtcggcgtcccggtgatcaccgacgtcacg
gcgaacgacctcaccgagaccggtcaggagctggccgccccgacgatcacgaccccgccc
gcgcacggcacggcgatcacgtccgaggacggcctgttctaccgccccgacgccgggttc
tcgggcgtggactccttcggctaccgggtctgcgacacctcggcgcccccgacctgcgac
accggcagggtgacggtgacggtcgacaacgtgttcacgaccggcgccgcgatcaccacc
gcccagggggtgccggtggtcaccgacctggccgacatcgcgagcgtcaccggcagcccg
ctcgacccgacggccgtccagcaggcggtccagccggagcacggcggcgccgtcatcaac
ggcaccaccggcgcggtgacctacacgccgctgcccggcttccacggcgaggactcctac
accgtccgggtgtgcgacacctcggcgccggtgcagtgcgtggacgccctcgtgcgggtc
accgtgaccgcgcccgaggtgcccgcggcgccggtgatcacgacctcggcccgcgcccgg
gtggcgatcccggtcgaccgctccggcgccccgcgctcggtccggctcaccgaccaggtg
cggatctccggtttccagcccggcggtacggcgaccggccgggccacgctgtacggcccg
gtcgaccgcccctcggcgtccatgtgcaccctcgccaacgcggtcgggacggtcttcttc
acgccccgcaacggcaccctgacgacgccgccgatcaccgtgcgcgagcccggctactac
acctgggtcgtctcgaccacggccgacgacgacaaccaggcggcctcccactcgtgcggc
caggtcgcggagacgacgctcgtccaccggcccggcgtcgggaaggtccgggtcgaggcc
ggctactccggcaccgaccgctcggtgcgcgcccgccggctgcgcccggtccaggtctcc
gtcccggcgctgggcatgaaggcccggatcgacaccgtcggcacccgccgcggcacgatg
ctgatccccggcaggatggctcggggcggctggctgctcggctccgcggcgcccggcgag
gccgtcggcgccacggtgatcgcgggccacgtgtccgaccgccgcgaccggcccggcgcc
ttcggcaagctgcgaaaggcgcgcaccggccagctggtcgaggtgcgcggggccgacggg
gtggtccggacctaccggatcacgtccgtcaggtcgcagccgcgcggccgcggcctgacc
ggcgccccggtgtcgaccaccggcgcgcaccggctcacgctggtgacctgcacgggcaag
gtgacctaccgcaacgggcgcttccactacaccaggaacctggtggtgacggcggtgccg
atcggctga
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integrated database retrieval system
