Pseudorhodoplanes sinuspersici: CAK95_05230
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Entry
CAK95_05230 CDS
T04834
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
psin
Pseudorhodoplanes sinuspersici
Pathway
psin02020
Two-component system
psin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CAK95_05230
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAK95_05230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psin03021
]
CAK95_05230
Transcription machinery [BR:
psin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAK95_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ARP98553
UniProt:
A0A1W6ZMB0
LinkDB
All DBs
Position
complement(1051198..1052742)
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AA seq
514 aa
AA seq
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MALTTRLEFRQSQALVMTPQLMQAIKLLQLSNLDLMAYVEEELEKNPLLERANDDDGPAA
PLEAAGEDTAGGGPDGEVAGEWMNGDLTTSRNAMEDELGTRLDNLFPEDGGTGPGSARND
DVTAAHSEWASVGSGGREDGEYNLEAFVSTEQTLTDHLAGQLSLAVIDPARRMIGQHLID
MVDESGYLIGDLQSVADKLGTSLADVESVLTVLQSFDPAGVCARNLTECLAIQLKERNRY
DPAMAALLSRLDLLAKRDFAALRKLCSVGDEDLVDMVTEIKQLNPKPGLAFGSAPVQPIV
PDVFVRAAPDGSFNIELNSDTLPKILLNQTYHARVSKTATASTDKAYLAEKLQSATWLIR
ALDQRARTILKVSAEIVKQQDAFFAHGVQHLRPLNLKTVADAISMHESTVSRVTANKYMA
TTRGIFELKYFFTSSIAASDGGEAHSAEAVRHRIKSLIDSETADGILSDDTIVEKLRESG
IDIARRTVAKYREGMRIASSVQRRREKQSAALAR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaccactcgcctcgaattccgccaaagccaggcgctcgttatgacgccgcag
ctgatgcaggccatcaagctgctgcagctctccaatctggacctgatggcttatgtcgag
gaggagcttgagaaaaaccctctgcttgagcgtgcgaacgacgatgacggtcccgccgcg
ccccttgaggctgcaggcgaggataccgccggcggcggtcccgatggcgaggtcgccggc
gaatggatgaacggcgatctgacgaccagccggaacgccatggaggacgaactcggaacg
cggctggacaacctctttccggaagatggcgggacaggtcctggctcggcccgcaacgac
gatgtgacggcggcccattcggaatgggcgagcgttggttcgggcgggcgcgaggatggc
gaatacaatctcgaggcctttgtctcgaccgagcagacgctgacggatcacctggccggg
cagctttcgctcgccgtcatcgatccggcgcgccgtatgatcggacagcatctgatcgat
atggtcgatgagtccggctacctcatcggcgatctgcaatccgttgccgacaagctcggc
accagccttgccgatgtcgaatccgttctcacggttctgcagagcttcgatccggccggc
gtctgtgcccgcaatctcaccgaatgtcttgcgatccagcttaaggagcgcaatcgctat
gatcccgccatggcagcattgctgagccggcttgatcttctggcgaagcgcgatttcgcg
gcattgcgcaaactctgcagcgtcggcgatgaagaccttgtcgatatggtcacggagatc
aagcagctcaatccgaaaccgggcctggcttttggctccgcgcccgtgcagccgatcgtt
ccggatgtgtttgttcgtgcggcgccggacggctcgttcaatattgaactgaattccgat
acgctgccgaagatcctgttgaaccagacctatcacgcgcgcgtttcgaagaccgcgacg
gcatcgacggacaaggcgtatctcgccgagaaacttcagtccgcgacatggctcatccgt
gcactggatcaacgtgcacgcacgatcctgaaagtgtcggcggaaatcgtgaaacagcag
gatgcgtttttcgcacatggcgttcagcatctgcgtccgctcaatctcaagactgtcgcc
gatgcgatctcgatgcatgaatcgacggtgtcgcgcgtcaccgccaacaaatatatggcg
acgacacgcggtatcttcgagctgaaatacttcttcacgtcgtcgatcgcagcctccgat
ggcggcgaagcgcattccgccgaagccgtgcggcatcgcatcaagagcctgatcgattcg
gaaacagccgacggcatcctgtccgacgatacgatcgtcgaaaagctgcgcgagtccggc
atcgacattgcgcgccgtactgtggcgaaatatcgcgagggcatgcgcattgcatcatcg
gtgcagcgccggcgcgagaaacaaagcgctgcgcttgcgcgataa
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