KEGG   Pseudorhodoplanes sinuspersici: CAK95_08070
Entry
CAK95_08070       CDS       T04834                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
psin  Pseudorhodoplanes sinuspersici
Pathway
psin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAK95_08070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psin03021]
    CAK95_08070
   03019 Messenger RNA biogenesis [BR:psin03019]
    CAK95_08070
Transcription machinery [BR:psin03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CAK95_08070
Messenger RNA biogenesis [BR:psin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CAK95_08070
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22 AAA_25 S1CSD-TOTE-2 Fungal_virus_P2_C AAA Spore_III_AA
Other DBs
NCBI-ProteinID: ARP99042
UniProt: A0A1W6ZP03
LinkDB
Position
1635148..1636413
AA seq 421 aa
MREVKLQDLKTKTPVELLSFAEEQEIENASTMRKQELMFAILKQLASREVDIVGEGVVEV
LSDGFGFLRSPEANYLPGPDDIYVSPSQIRRFGLRTGDTVEGHIRSPKEGERYFALLKVS
TINFEDPDKARHKINFDNLTPLYPNERLKMEHDDPTKKDLSARVIDIVAPIGKGQRALVV
APPRTGKTVLLQNIAHAITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAS
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKVADKRTFPA
MDITRSGTRKEELLTDPQQLKKMYVLRRILNPMGTMDAIDFLLDKLRNTKNNAEFFESMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaagtgaagcttcaagacctcaagaccaaaacccccgttgaattgctctccttt
gccgaagagcaggaaatcgaaaacgccagcaccatgcgcaagcaggagctgatgttcgcg
atcctcaagcaactcgctagccgtgaagtcgacatcgtcggcgaaggcgtggttgaggtg
ctctccgacggttttggatttctccgttcgccggaagcgaattatttgcccggccccgat
gacatctacgtttcgccctcgcagatccgccgtttcggtctgcgcaccggcgacacggtg
gaaggccacattcgttcgccgaaggaaggcgaacgctatttcgccctgctcaaggtctcg
accatcaatttcgaggaccctgacaaggcgcgccacaagatcaacttcgataacctgacg
ccgctctatcccaatgagcggctgaagatggaacatgacgatccgaccaagaaggatctg
tcggctcgcgtcatcgacatcgtcgcgccgatcggcaaaggccagcgtgcgctggttgtc
gcgccgccgcgcaccggcaagaccgtgctgctgcagaacatcgcgcacgccattaccgcc
aatcatcccgaatgctatctgatcgtgctgctgatcgacgaacgtccggaagaagtcacc
gacatgcagcgttcggtgaagggcgaggtcgtgtcttcgaccttcgacgaaccagcctcg
cgtcacgttcaagtcgccgaaatggtgatcgaaaaggccaagcgcctggtcgaacacggc
cgggacgtcgtgatcctgctggattcgatcacccgcctcggccgtgcctacaacactgtc
gtgccgtcatccggcaaggtgctgaccggcggtgtcgatgccaatgcgttgcagcgtccg
aagcgtttcttcggcgccgcgcgtaacatcgaggaaggcggctcgctgaccatcatcgcc
accgcgctgatcgataccggctcgcgcatggacgaagtgatcttcgaagagttcaagggt
accggcaattccgaactcatcctcgaccgcaaggtcgccgacaagcgcaccttcccggcg
atggacatcacacggtcaggcacccgcaaggaagaactgctcaccgatccgcagcagctc
aagaagatgtacgtcctccgccgcatcctcaatccgatggggacgatggacgccatcgac
ttcctgctcgacaagctgcgcaacacgaagaacaacgccgagttcttcgagagcatgaat
acctga

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