Pseudorhodoplanes sinuspersici: CAK95_21195
Help
Entry
CAK95_21195 CDS
T04834
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psin
Pseudorhodoplanes sinuspersici
Pathway
psin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAK95_21195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psin03021
]
CAK95_21195
03400 DNA repair and recombination proteins [BR:
psin03400
]
CAK95_21195
Enzymes [BR:
psin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAK95_21195
Transcription machinery [BR:
psin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAK95_21195
DNA repair and recombination proteins [BR:
psin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAK95_21195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ARQ01330
UniProt:
A0A1W6ZVI1
LinkDB
All DBs
Position
4378267..4382469
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEIMNLFSPQVPAQVFDQIRISIASPEKIQSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTPLQDRQLLSEEEYLKAQDEYGQDSFTA
MIGAEAIREMLKALDLHKMQADLRAEIGETDSDIKKKKFAKRVKLIEAFIESGNKPEWMI
LTHVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSLMRDGEPGEGKVFGTISDIEHALS
QKVITLHTKIKYRWVGTGPDGKPFNKLYDTTPGRVLLGQVLPKSSVVTFDVVNKLMTKRE
ISNMIDTVYRHCGQKDTVIFCDRIMALGFHHAFKAGISFGKDDMVVPEAKWKIVDKTREE
AKDFEQQYNDGLITQGEKYNKVVDAWSKCTEAIAAEMMTEISTTKKDPKTGREKQINSIY
MMAHSGARGSPAQMRQLAGMRGLMAKPDGSIIETPIVSNFKEGLTVMEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIITSFDCGTDAGIKVRAIIDAGTVVASLGIRILGRT
TAEDVKDPATGEVIVPNGTLLGEAEVDKITQANVQEVRIRSVLTCASTAGVCAACYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSFIESNFEGTIRLKAKD
KQANAVIKNSEGALIVMSRNVTLAVVDPDGTERATHRLPYGARLRVNEGDVVKRGQRMAE
WDPYTRPIITEVDGFAELEDLVEGQSVAETQDESTGITKRVVTDWRTSQRAADLRPAIAI
KDKDGKVLKLARGGDARYPLAIDAILSVDQGAAVYAGDVIARIPTESAKTRDITGGLPRV
AELFEARRPKEAAVIAEISGTIRFGRDYKNKRRISIEPAEQDVEPVEYLIPKGKHIHLQD
GDLIEKGDSIVEGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVGINDKHIEVIVRQM
LQKVEIDDSGETDLIQGEQLDRVEMDQINAKAVEQGKKPATGTPVLLGITKASLQTRSFI
SAASFQETTRVLTEAAVNGKADTLDGLKENVIVGRLIPAGTGAMMSTLREIATKRDSLIL
DEREKEAVKPVETPALPAAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctgttcagcccgcaggtgccggctcaggtcttcgaccag
atccgcatctcgatcgcgtcacctgagaagattcagtcctggtcgtacggcgagatcaag
aagccggaaaccatcaactaccggaccttcaagccggagcgtgatggcttgttctgtgcg
cgcatcttcggcccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgctcggtcgaagtcacgctctcgcgcgtgcgtcgt
gagcgcatgggccatatcgagctcgcggctccggtcgcccatatctggttcctgaagtcg
ctgccgagccgcatcggccttctgctcgatatgacgctgaaggatctcgagcggattctg
tacttcgagtactacgtcgttctggagccgggcctcaccccactgcaggaccgtcagctc
ttgtccgaagaggaatatctcaaggcgcaggacgaatacggtcaggacagcttcaccgcc
atgatcggcgcggaagcgatccgtgagatgctgaaggcgctcgacctgcacaagatgcag
gccgatctgcgcgccgaaatcggcgagaccgattctgacatcaagaaaaagaagttcgcc
aagcgcgtgaagctgatcgaagcgttcatcgagtccggcaacaagccggaatggatgatc
ctgacgcatgtgccggtgattccgccggacctgcgcccgctcgttccgctcgatggcgga
cgctttgcgacctcggacctcaacgacctgtatcgccgcgtcatcaaccgcaacaatcgt
ctgaagcggttgatcgaactgcgtgcgccggacatcatcatccgcaacgagaagcgcatg
cttcaggaagcggtcgatgcgctgttcgacaacggccgtcgtggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctcgccgacatgctgaaaggcaaacagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtgatcgtggtcggt
cccgagctgaagctgcatcagtgtggcctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctattcgcggcttgacgcgaagggcctgtccaccaccgtgaagcaggcgaag
aagttggtcgagaaggagaagcccgaggtttgggatattctcgacgaggtcattcgcgaa
catccggtgatgctgaaccgcgcgccgacgctgcatcgtctcggcattcaggcgttcgag
ccggtgctgatcgaaggcaaggcgatccagcttcatccgctggtttgcgccgcgttcaac
gccgacttcgacggcgaccagatggctgtgcacgttccgctgtcgcttgaagcgcagttg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcatccggcgaacggccagccg
atcatcgtgccgtcgcaggatatcgtgctcggtctctattatctctcgctgatgcgtgac
ggtgagccgggtgaaggcaaggtgttcggcaccatctccgacatcgagcatgcgctgtcg
cagaaggtcattacgcttcacaccaagatcaagtatcgctgggtcggtaccggtccggac
ggcaagccgttcaacaagctctacgacacgacaccgggccgcgtactactcggccaggtg
ctgccgaagagctcggttgtcacgttcgatgtcgtcaacaagctgatgaccaagcgtgaa
atctcgaacatgatcgacaccgtctaccgtcactgcggtcagaaggacacggtcatcttc
tgcgatcgcatcatggcgctgggcttccatcacgctttcaaggccggcatctcgttcggc
aaggacgacatggtcgtacctgaggcgaagtggaagatcgtcgacaagacccgcgaagag
gctaaggactttgagcagcaatacaatgacggcctgatcacgcagggtgagaagtacaac
aaggtggtcgacgcctggtcgaaatgcaccgaggcgattgccgccgagatgatgaccgag
atctcgaccaccaagaaggatccgaagaccggccgtgaaaagcagatcaactcgatctac
atgatggcccattccggagcgcgcggctcgcccgcccagatgcggcagctcgccggtatg
cgcggtctcatggccaagccggacggctccatcatcgagacaccgatcgtctcgaacttc
aaggaaggcctgacggtgatggagtacttcaactccacccacggtgcccgtaagggtctc
gcggatacggcgttgaagacggcgaactccggttacctgacacgccgtctcgtcgacgtg
gcgcaggactgcatcatcacgtcgttcgactgcggtacggatgcaggcatcaaggtgcgt
gcgatcatcgacgcgggcaccgtggtggcatcgctcggcatccgtatcctgggtcgcacc
acggccgaggatgtgaaggatccggcgaccggcgaagtgatcgtgccgaatggcacgctg
ctcggcgaggccgaggtcgacaagatcacacaggcgaatgtgcaggaagtgcgcatccgt
tcggtgctgacctgtgcctcgactgccggtgtctgcgcggcttgctacggacgcgatctg
gcccgtggtacgcccgtcaacatgggcgaagcggttggcgtcatcgcggcgcagtcgatc
ggtgagcccggcacccagctcacgatgcgtacgttccatatcggtggcgcggcgcagatc
aacgagcagtcgttcatcgagtcgaatttcgaaggcacgatcaggctgaaggcgaaggac
aagcaagccaacgccgtgatcaagaattcggaaggcgctctcatcgtgatgagccgcaac
gtcacgcttgcggtcgtcgatcctgacggcaccgagcgggcgacccatcgtctgccttat
ggcgcgcgtctgcgcgtcaatgagggcgatgtggtgaagcgcggacagcgtatggcggaa
tgggatccttatacccgtccgatcatcaccgaagtggacggtttcgccgaactggaagat
ctggtcgaaggtcagtcggttgcggaaacgcaggacgaatccaccggcatcaccaagcgc
gtggtgaccgattggcgtacgtcccagcgtgcggcggatctgcgcccggcgatcgcgatc
aaggacaaggacggcaaggtcctcaagctggcccgcggtggcgacgctcgctatccgctg
gcgatcgacgcgattctttcggttgaccaaggcgcggccgtgtatgcaggcgacgtcatc
gcccgtatcccgaccgagagtgccaagacccgcgacatcaccggcggtctgccgcgggtg
gcggagctgttcgaggcgcgtcgtccgaaggaagcggcggtcatcgccgaaatctccggt
acgatccgctttggccgcgactataagaacaagcgtcgcatttcgattgagcctgcggag
caggatgtcgagccggtcgagtatctgatcccgaaaggcaagcacatccatcttcaggat
ggcgacctgatcgagaaaggtgactccatcgtcgaaggcaatccggcgccgcacgacatt
ctggcgatcaagggcgtcgaggaactcgccgcctatctggtcaacgaaatccaggaggtc
tatcggttgcagggcgtgggcatcaacgacaagcacatcgaggtgattgtccgtcagatg
ctgcagaaggtggagatcgacgactcgggcgagaccgacctgatccagggcgagcagctc
gaccgtgtcgagatggaccagatcaacgccaaggcggtggagcagggcaagaagccggcg
accggcacaccggttctgctcggcatcaccaaggcttcgctgcagacgcgatccttcatc
tcggcggcgtcgttccaggagaccacgcgcgtgctgacggaggctgccgttaacggcaag
gccgacacgctcgacggcctcaaggaaaacgtcatcgttggccgcctgatcccggcgggc
accggagctatgatgagcacgctgcgcgaaatcgccaccaagcgcgactcgctcattctg
gacgagcgcgagaaggaagcggtgaagccggtcgaaacgccggcgctgccggcggcggaa
taa
DBGET
integrated database retrieval system
