Pseudorhodoplanes sinuspersici: CAK95_21355
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Entry
CAK95_21355 CDS
T04834
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psin
Pseudorhodoplanes sinuspersici
Pathway
psin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAK95_21355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psin03021
]
CAK95_21355
03400 DNA repair and recombination proteins [BR:
psin03400
]
CAK95_21355
Enzymes [BR:
psin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAK95_21355
Transcription machinery [BR:
psin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAK95_21355
DNA repair and recombination proteins [BR:
psin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAK95_21355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF211
DUF4249
IDH
Motif
Other DBs
NCBI-ProteinID:
ARQ01362
UniProt:
A0A1W6ZVH2
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All DBs
Position
4402728..4403759
Genome browser
AA seq
343 aa
AA seq
DB search
MGANVTIQKNWQELIRPNKLQVSAGADPRREATLIAEPLERGFGLTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDIAIKMQGEGPKRMVVKKSGPGIVTA
GDISTVGDIVILNPELVLCTLDEGAEIRMEFTVNTGKGYVASERNRPEDAPIGLIPVDSL
YSPVKKVSYKVENTREGQILDYDKLTLQIETNGAVSPEDALAYAARILQDQLNVFVNFEE
PRKEVVAESIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKTKAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDDLAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaaacgtgacgatccagaaaaattggcaggaactgatcaggccgaacaagctg
caggtgtcggcgggtgccgatccgcgtcgtgaggcgacgctgatcgcagaaccgcttgag
cgcggctttggtctcacacttggtaatgcgctgcggcgcattttgttgtcttcgctgcag
ggcgccgctgtgcagtcagtccatatcgacggtgtgctgcacgaattctcgtcgattgcc
ggcgtccgcgaggacgtgaccgacatcgtcctcaatatcaaggacatcgccatcaagatg
cagggcgaaggccccaagcgcatggtggtgaagaagtccggccccggcatcgtgaccgcc
ggcgacatctcgaccgtcggcgatatcgtcatcctcaatccggaactcgtgctctgcacc
ctggacgagggggccgagatccgcatggaattcaccgtcaataccggcaagggctatgtc
gcctccgagcgcaatcgtcccgaggatgcgccgatcggcctgatcccggtcgacagcctg
tattcgccggtgaagaaggtctcctacaaggtcgagaacacccgcgaaggtcagatcctc
gattacgacaagctgacgctgcagatcgaaaccaatggcgcggtgtcgcctgaggacgcg
ctcgcctatgctgcacgcatcctgcaggaccagctcaacgtgttcgtgaatttcgaggag
ccgcgcaaggaagtcgtcgccgagtcgatccccgatctcgccttcaacccggccttcctc
aagaaggtggacgaactggaattgtcggtgcgttcggccaactgcctgaagaacgacaac
attgtctatatcggcgatctcgttcagaagaccaaagccgagatgctgcggaccccgaat
ttcggccgcaagtcgctgaacgaaatcaaggaagtgctggcgcagatgggcctgcacctc
ggtatggaagtgcctggctggccgccggagaatatcgacgacctcgccaagcgtttcgag
gaccattactga
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