Pediococcus siamensis: ACLJJ6_03830
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Entry
ACLJJ6_03830 CDS
T11433
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psis Pediococcus siamensis
Pathway
psis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACLJJ6_03830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psis03400
]
ACLJJ6_03830
Enzymes [BR:
psis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACLJJ6_03830
DNA repair and recombination proteins [BR:
psis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACLJJ6_03830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
PIF1
SAM_CEP-1_C
AAA_29
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_22
TsaE
AAA_7
SLFN-g3_helicase
HTH_IclR
AAA
DEAD
AAA_28
T2SSE
AAA_16
NB-ARC
PH_35
Mg_chelatase
Zeta_toxin
UvrD_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
XNN32211
LinkDB
All DBs
Position
786140..788632
Genome browser
AA seq
830 aa
AA seq
DB search
MASESLNLFDSVPQEEPGSQARQQFVVGKVAATFFSSPDSFYKVLLVKISETNIDWHEDE
IVVTGSFGDVREEQTYRFVGKTVTHPKYGTQFQALNYENATPTTKEGLIAYLAGEEFKGI
GKKTAEKIVALLGITAIDKIINDPDVLAPLHLKKELQTNLIAKLKANNGMEQIIIGLNGY
GFGSQLAASIYNHYREETLDILHKNPYQLIEDIEGIGFKKADQIAETLGIASDSPARIDG
AILTALNDLSATNGDTYTDAKTLLKTTLSLLENSRNEAIDPQKLADELIDLAKSGKVVGE
ENRIYLRSLFESEWQIAEHLKRLNEAKETHQFAENEIATAIDLAEKQFQITYDHSQRQAL
TQAMQSKLFLLTGGPGTGKTTIINGIVKVFATLNEFSLDVNDYCETPFPILLAAPTGRAA
KRMSEVTGLPASTIHRLLGLTGRESNPDQETKDLEGGLLIVDEMSMVDTYLFKTLVRAIA
NQMKVILVGDKDQLPSVGPGQVFHDLLASSTISKIELTKIYRQGDQSSIIPLAHAIREGH
LPTDFAQNQADRSFIPCPTNQIESVITQVVKKAEQKHFTAQDIQVLAPMYRGVAGIDRLN
VALQAILNPKKSARTKEVEFRGQHFRIGDKVLQLVNVPENNVFNGDMGIIKSVILAGDKD
NTDKQDKLVIAFDQSEVTYARKDWLQITLAYCTSIHKAQGSEFKMVILPMVPQYSRMLQR
NLLYTAVSRAESLLILLGDQNAFERCVQNLAVNRQTTLTQRLQTTFSGSKPEIKLKETSK
KNEEPQPLSETGGAPGMTDEHRLTTAKVLSQAIDPMIGMAGITPQSFMKA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaatcactcaacttatttgacagcgtcccacaggaggagccgggctcacaa
gctaggcaacaatttgtggtgggcaaagttgcggcaacctttttttccagtccagatagc
ttttataaagttttgctagttaaaatttctgaaacaaatatcgactggcatgaagatgaa
attgtggtaactgggagtttcggagatgtccgtgaggagcaaacctatcgctttgtcgga
aaaaccgtcacgcatcccaaatacggcacgcaattccaggcgcttaattatgagaacgcc
acaccgactaccaaagaagggttaattgcttatttagccggtgaagaatttaagggtatt
ggtaaaaaaacggccgaaaaaattgtggctttgctgggaattacggcgatcgataaaatt
attaatgatccagatgtgttggcacctttgcatttaaaaaaagagttacagacaaatttg
atcgcaaagctgaaagctaataacgggatggaacaaattatcatcgggttgaatggctac
ggttttgggagccagttggcggcaagtatttacaaccattatcgcgaggaaacgctggat
attcttcacaaaaacccttatcagttaatagaggatattgaggggattggcttcaaaaaa
gccgaccaaattgccgaaaccttaggcattgcctctgattcgccagcacgcatcgatggc
gccattttgacggcgctcaatgacttgagtgccacgaatggggatacgtatacggatgcc
aaaacacttttaaaaacaaccttatcactcttggaaaatagtcgtaatgaggctattgat
ccgcaaaaattagcagatgaattaattgatttagctaagtctggtaaagtcgttggtgag
gaaaaccgaatttacttgcgtagcctgttcgaaagtgaatggcagattgccgaacattta
aaacggttaaatgaagctaaagagacccatcagtttgcggaaaacgaaattgccactgcg
attgatttagctgaaaagcagtttcagattacttatgatcactcacaacgacaggcactc
acacaagcgatgcaatcaaaattattcctgctgacgggcggtcccggcacaggcaaaacg
accataattaacggaattgtaaaagtgtttgcgaccttaaatgaattttcacttgatgtc
aacgattattgtgaaaccccgtttccaatccttttggcggcgcccactggacgagcagct
aaacgcatgagtgaagttaccgggttacccgcgagtaccattcatcgcttactgggccta
actggacgggaaagcaatcctgatcaagaaaccaaagatctagaggggggccttctgatt
gttgacgaaatgtcaatggtagacacctatttatttaaaacgttagtccgcgcgattgcc
aatcaaatgaaagttattctggtcggtgataaggaccaattgccttccgtgggacctggt
caggtttttcatgacttgctggccagttctaccatttctaaaattgaattgacaaaaatt
tatcgtcagggagatcaatccagcattatacctctagctcatgcgattagggaaggacat
ttaccaactgattttgcacaaaatcaagcagaccggtcgtttattccttgtccgactaat
cagatcgaaagtgtgattacccaagtcgtcaaaaaagcggaacaaaaacattttactgcc
caagacattcaggtgcttgctcccatgtatcgaggggtagcaggaattgatcgcctgaat
gtggctttacaggctattcttaatcctaaaaaaagtgccagaacaaaggaagttgaattt
cggggccaacattttcgaattggggataaggttctgcagctcgtcaatgttcctgaaaac
aatgtttttaatggtgacatggggattattaagagcgttattttggctggcgataaagat
aatactgataaacaagacaagttggtcatcgcctttgaccagtccgaagtgacgtacgca
cgaaaagactggctccaaattactttagcctactgtacctcaattcataaggcacagggg
agtgagtttaagatggtaattttaccgatggtgccgcagtactcacgaatgcttcagcgt
aatttattgtataccgccgtttcacgggcagagtcgcttttgattttattgggtgaccaa
aacgcttttgaacgatgtgttcagaatttagctgttaatcggcaaacaactttaacacag
cggttgcagacaacattttcgggctcaaaaccagaaataaaattaaaagaaacaagtaaa
aaaaatgaagagccacagcccttatctgaaacaggcggtgcgccagggatgactgatgag
catcgcttgacgactgcaaaggtccttagtcaagcaattgatccgatgattgggatggcc
ggtatcacaccacagagctttatgaaagcatag
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