Pediococcus siamensis: ACLJJ6_04990
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Entry
ACLJJ6_04990 CDS
T11433
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
psis Pediococcus siamensis
Pathway
psis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLJJ6_04990 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psis03019
]
ACLJJ6_04990 (rnjA)
Messenger RNA biogenesis [BR:
psis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACLJJ6_04990 (rnjA)
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GFIT
Other DBs
NCBI-ProteinID:
XNN32430
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Position
complement(1044924..1046609)
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AA seq
561 aa
AA seq
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MRKLKVKNNEVAVYAVGGLGEIGKNMYCVQYQDEIVIIDCGIKFPEDELLGVDYIIPDYQ
FLIDNQKKIKALVITHGHEDHIGGIPFFLQKLNVPIWAGPFASELIKGKLKEHNLLRTTE
LHELQEDTVLKFRKLSVSFFRTTHSIPDTLGIAVHTPQGTVVQTGDFKFDLTPVGDLPSP
DFQKMAAIGGKDSLLLMSDSTNAERPTFTKSERFVEKSIKRIFTEIQGRIIFATFASNVY
RVREACEAALEQGRKIAIFGRSMENAIEAGQKLGYLNIPEESLVDAQELNNLPANKLMIL
CTGSQGEPMAALSRIANGTHRQISLQPDDTVVFSSNPIPGNTVSVNNLINKLDEAGVTVI
HGKVNNIHTSGHGGQEDQKLMLRLIKPKFFMPCHGEYRMQMIHKKLAEQTGVPEDNCFIM
KNGDVLALTRDSARIADHFSAGDVYLNDADINDNVSSQILSDRTILASEGVVTAVATINI
KKHRITAGPDTISRGFIYMRESNELIHDTNKAAFHSLLNTMKQKAHPTEKDFSSNIIDDL
QEFLYQKTERSPMIVPMLIFE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaattaaaagttaagaataatgaagtggctgtctatgcagtcggtggtttaggc
gaaatcggtaaaaatatgtactgcgttcaataccaagatgagattgttatcatcgattgc
gggattaaatttccagaagatgaattattgggtgttgattatatcattcctgattatcag
tttttaattgacaaccaaaagaagattaaggcattagtcatcacacatgggcatgaagat
catattggtggcattccgttctttcttcaaaagcttaatgtcccaatttgggctggtccc
tttgcttcagagttaattaaaggaaaactaaaagaacataatttgttgcggactacggag
ttacacgaacttcaagaagacactgttctgaagttccgtaaactttctgtgtcatttttc
cggacaacgcattctattcctgatacgcttggcattgcagtgcacacaccgcagggaacg
gttgtccaaaccggggatttcaagttcgatttgacgcccgttggtgacttgccttcgcca
gattttcagaagatggcggcaattggtggcaaggattctttgctcctgatgtctgacagt
actaatgcggaacgcccaacgtttacaaaatcagaacgatttgtcgaaaaaagcattaaa
cggatttttactgaaattcaaggacgaatcatttttgctacgtttgcatctaatgtgtac
cgggtacgcgaggcgtgtgaagcagctttggaacaaggtcggaaaattgctatttttggg
cggagcatggaaaatgccattgaagctggccaaaagctggggtatttaaatattccagaa
gagtccttagtagatgcgcaagaattaaataatttgccagccaataagctcatgatctta
tgtacaggctcgcagggagaaccaatggctgctttgagtcgaattgcaaatggtacccat
cgccaaatcagtttgcagcctgatgacacagtcgttttctctagtaacccaattcctgga
aatacagttagcgttaataatctgattaacaaattagatgaggctggcgttacagttata
catgggaaagtcaataatattcacacttcaggtcatggtggccaggaagatcagaaactg
atgctccgcttgattaagcctaaattcttcatgccttgtcatggggaatatcggatgcag
atgatccataagaagctagctgagcaaaccggtgttcctgaagataattgctttattatg
aaaaatggtgatgtcttagctttaactcgcgatagtgcgcgcattgccgatcattttagc
gctggtgatgtttacttgaatgatgctgatattaacgataatgtcagttcccaaattttg
agtgatcgaaccattctggccagtgaaggtgtggtaacggcagttgcgacaatcaacatc
aagaagcatcgtattacagctggtccagatacgatttcgcgcggttttatctacatgcgt
gaatctaacgaattgatccatgataccaataaggctgcgtttcattctttgttaaataca
atgaagcaaaaagcacatccgacagaaaaagattttagcagcaatattattgatgattta
caagaattcttatatcagaagacggaacgaagcccaatgatcgtaccgatgctgatattt
gaataa
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