Pediococcus siamensis: ACLJJ6_05895
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Entry
ACLJJ6_05895 CDS
T11433
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psis Pediococcus siamensis
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psis03019
]
ACLJJ6_05895
Messenger RNA biogenesis [BR:
psis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACLJJ6_05895
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Other DBs
NCBI-ProteinID:
XNN30644
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Position
complement(1224320..1225276)
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AA seq
318 aa
AA seq
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MDNKRLFDYAVDETLNIFVLIKSSEVRVAKNGKDFLSLVFEDRSGDIGGKFWDASAKDVE
NFKAGQVIFLNGKRENYKGTPQIKILGMRLATETEPNNPGLYTKRAPMNATDMKEEISKV
LFDITNPNWNRIVRFLLQKYDAQFYTYPAAKTNHHAYQGGLAFHTISILRLAHQVSEQYS
QIDRSLLYAGAILHDLGKTIELSGPVSTTYTVEGNLLGHIVIMDGEIVKACQELKISDDS
EDLLLLRHMIVSHHGLKEYGSPIEPLLLEAVVLHDLDDLDASIQMVTGALDHTKAGTFSE
RIFGMDGRNFYKRVGHQG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggataataaaaggcttttcgactatgcggttgacgaaacactgaatatttttgtgtta
attaaaagttctgaagtgcgagtcgccaaaaatggcaaagattttctttcgttagttttt
gaagaccggtctggtgatattggtggcaaattttgggatgcgagtgcaaaagatgtcgaa
aacttcaaagcaggacaagtgatctttttaaatggtaaacgtgaaaattataaggggacg
ccccagattaaaattttagggatgcgtttagctactgaaaccgaaccgaataatcccgga
ttatataccaaaagagcaccgatgaacgcaactgatatgaaagaggaaattagtaaggtt
ctatttgatattaccaatcctaattggaatcgaatcgttcgttttcttttacaaaaatac
gacgcacaattttatacttatccggctgccaaaacgaatcatcatgcctatcaagggggc
ttagcctttcatacaatttcaattctccgtctggctcatcaagtcagtgagcagtatagc
caaattgatcgctccttattatatgcgggggcgattctccacgaccttgggaaaaccatc
gagttgtcggggccagtttccacgacatatacggtggagggcaatcttctagggcacatc
gtgattatggacggcgaaattgtgaaggcgtgtcaggaactgaagatcagtgatgatagt
gaggatctcttgttattaagacacatgattgtttctcatcacggcttgaaggaatacggg
tccccaattgagcctttattgttagaggctgtcgttttacacgatttagacgatttagat
gcttccattcaaatggtgactggggcccttgaccataccaaggcaggtacgttttcggag
cgaattttcggaatggatggccgcaatttttacaaacgcgtggggcatcagggctaa
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