Pediococcus siamensis: ACLJJ6_07655
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Entry
ACLJJ6_07655 CDS
T11433
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psis Pediococcus siamensis
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psis03400
]
ACLJJ6_07655 (radA)
DNA repair and recombination proteins [BR:
psis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACLJJ6_07655 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
ABC_tran
Lon_C
SLFN-g3_helicase
AAA_16
AAA_14
AAA_22
Rad51
AAA_24
nSTAND3
nSTAND_NTPase5
AAA_19
AAA_5
NPHP3_N
divDNAB
AAA
KTI12
AAA_30
NTPase_1
GvpD_P-loop
ATPase_2
MCM
RUBY_RBDX
NACHT
ArsA_ATPase
CbiA
AAA_18
Zn_ribbon_Thio2
NB-ARC
DUF7129
Motif
Other DBs
NCBI-ProteinID:
XNN30941
LinkDB
All DBs
Position
complement(1555796..1557166)
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AA seq
456 aa
AA seq
DB search
MAKAKTQFVCQNCGYVSPRFLGRCPSCGQWNTLVEERVASEKENHKARVSFEGHHAKPQL
ISQVDMSETPRVKTGLEEFNRVLGGGIVSGSLVLIGGDPGIGKSTLLLQISGQLSETKHR
VLYVSGEESAAQIKMRADRLHVASENFYLYPETDMTNIQAAIKELKPTYVIIDSIQTMQE
PEIQSAVGSVAQVREITAELMQIAKTNNITIFIVGHVTKGGAIAGPKILEHMVDTVLYFE
GDLHHTYRILRAVKNRFGSTNELGIFEMRETGLKEVANPSEIFLEERLKDATGSAIVVSM
EGTRPILVEVQALITPTTYGNAKRTASGLDHNRVSLIMAVLEKRANFLLQNQDAYLKAAG
GVKLDEPAIDLAIAISIASSYRNKGTDPMDSFVGEIGLTGEIRRVNRIEQRVAEAQKLGF
KRIFVPKNNLQGWTPTAGIEVVGVATLTEALRKIFS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggctaaaactcaatttgtttgtcagaattgtggctatgtctcgccgcgcttt
ttagggcgctgtcctagttgcggtcaatggaacacgttggttgaggagcgtgtggccagt
gaaaaagaaaatcataaggcgcgggtcagttttgaaggacaccatgcaaaaccgcaatta
attagtcaggtggatatgagtgaaacgccccgggttaaaaccggcctggaagaatttaac
cgggtcttaggtggtggtattgtttcgggatccttggtactcattggtggtgatccagga
attggaaaatcaacgcttttgctgcaaatttcggggcaactaagtgagacgaagcatcgt
gtgctgtatgtctctggtgaagaaagtgctgctcagattaaaatgcgcgccgatcgttta
catgtggccagtgagaacttttatttgtatccggaaacggatatgactaatattcaggcg
gcgattaaggaactgaagccaacctacgtgattattgattcaatccaaacgatgcaagag
ccagaaattcagtcagcagtcggaagtgtggctcaagtccgtgaaatcactgcggaatta
atgcagatcgccaagacaaacaacatcaccatttttattgtgggtcacgtcacaaaaggc
ggtgcaattgctggacccaagattctggaacacatggtggatacggttctttactttgaa
ggtgacttacatcacacttaccggatattacgggccgttaaaaatcggttcggttcgact
aatgagttgggtatttttgaaatgcgggaaaccggcctaaaggaagtagccaatccttct
gaaatctttttggaagagcgcttaaaggatgccacgggctcggcaatcgtcgtttcaatg
gagggaacccggccaatcttagttgaagttcaagcactcattacaccaaccacttatggg
aatgccaagcgcacggcgagtgggttagaccataaccgggtgtcgttgattatggcggta
cttgaaaaaagggctaactttctgttacaaaatcaagatgcgtatcttaaagcggcgggc
ggtgtaaagttggatgaaccggcgattgacttagcaattgccattagtattgcatctagt
tatcgcaataagggtacagatccaatggattcatttgtaggtgaaatcggattaaccggt
gaaattcggcgggtcaatcggattgaacaacgggttgccgaagcccaaaaattaggtttc
aagcggattttcgtgccgaagaataatctccaggggtggacaccgaccgccggaattgaa
gttgtcggtgtggcgaccttaacggaagcgttacggaagatttttagttga
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