Pediococcus siamensis: ACLJJ6_09075
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Entry
ACLJJ6_09075 CDS
T11433
Symbol
abc-f
Name
(GenBank) ribosomal protection-like ABC-F family protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
psis Pediococcus siamensis
Pathway
psis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ACLJJ6_09075 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psis02000
]
ACLJJ6_09075 (abc-f)
01504 Antimicrobial resistance genes [BR:
psis01504
]
ACLJJ6_09075 (abc-f)
Transporters [BR:
psis02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
ACLJJ6_09075 (abc-f)
Antimicrobial resistance genes [BR:
psis01504
]
Gene variants
Macrolide resistance genes
Transporters
ACLJJ6_09075 (abc-f)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_23
MMR_HSR1
MeaB
AAA_18
AAA_15
RsgA_GTPase
AAA_22
NACHT
AAA
NB-ARC
KAP_NTPase
AAA_16
AAA_7
DO-GTPase2
ABC_tran_Xtn
AAA_27
Myo5a
LptD_2
cobW
ATP-synt_ab
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
XNN31200
LinkDB
All DBs
Position
complement(1876711..1878219)
Genome browser
AA seq
502 aa
AA seq
DB search
MSKIEIKNLTFGYDTQGSLLFDHVNLNLDSNWKLGLIGRNGRGKTTFLNLLQHKMNYQGQ
IQTNLAFDYFPQTIKNPHQLTFYVLNDLGVEAQWEVERELNLLDTDPEILWRDFSSLSGG
EQTKVLLATLFTQATNFPLIDEPTNHLDIKAREQVAAYLQQKRQGFIVISHDRKFVDQVA
DHILSIEKADILMYQGNFATYEAQKRLSDTHEKMENTKLKKDIQRLKQTAAKKAEWSHSK
ESEKWGNSHIKGSGSVGDKGAIGARAARTMKRAMTLQSHMQSEIGEKEKLLKNIEYVDPL
TINFQPGHHDRLLTVNQLSLQYPDTNRALFQPLSFEVKKGERVGIVGPNGAGKSTLIQAV
LGNFSGEIKGEIFQPQKLRISYVRQSYDDNRGTLQEFAETQHLDYQEFLNNLHKLGLDRN
VFTTRIERMSMGQQKKVELAKSLSTPAEFYLWDEPLNYLDIFNQEQLETLISSVKPTMLI
VEHDREFIEHVTNRIVELEADK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaattgaaattaaaaacttaacgtttgggtacgatacacaaggtagcttgcta
tttgaccatgtcaacttaaatttggatagcaattggaagttaggcctaattggccgtaat
ggccggggcaaaacgacttttttgaacttgctgcagcataaaatgaattatcagggtcaa
attcaaactaatttggcttttgattactttccccagactatcaagaatccacatcaactg
actttttatgttttaaacgatttaggcgttgaagcgcagtgggaagtggagcgggagctg
aatttattggacacggatcctgaaattttgtggcgtgatttttcgtcgctttccggaggt
gaacaaactaaagttttgctggcaaccttgtttacgcaggctactaactttccgttaatt
gacgaacccactaatcatcttgatattaaggcacgtgaacaggtggctgcttatttgcag
cagaaacggcaaggattcatcgtcattagccatgatcgtaaatttgtggatcaagttgcc
gatcatattctgtcgattgaaaaggcagatattttgatgtatcagggtaattttgcaacg
tatgaggcacaaaaaaggttgtccgatacccatgaaaaaatggaaaatacgaagttgaaa
aaagatatacagcggttgaaacaaacagccgccaaaaaagccgaatggtcacactccaaa
gaaagtgaaaagtggggtaattcccatattaaaggaagcggatcggtcggtgataagggg
gcaattggtgcacgcgctgcaagaacgatgaaacgggcaatgactttacaaagtcatatg
caaagcgagattggtgaaaaggaaaagttactcaaaaatattgagtacgtagatccgctg
acgataaattttcagccgggtcaccatgaccgtttactgacggttaatcagttatctttg
cagtatccggataccaatcgcgcactgtttcaacccctttcctttgaagtgaaaaaggga
gaacgtgttggaatcgttggtcccaatggtgcaggcaaatcaactttaattcaagctgtt
ttaggcaatttttccggagaaataaaaggcgaaatctttcagccacaaaaattacgaatc
agttatgtgcggcaaagctacgacgataatcgaggaacattacaggaattcgctgagacc
cagcatttggattatcaggagttcttaaataacttacacaaactaggtttagaccgtaac
gtgtttaccacgcgaatcgaacgtatgagtatgggacagcagaaaaaggtggaattagct
aagtctttgtcgaccccggccgagttctatttatgggatgaaccgttgaattatctggat
atcttcaaccaagagcagctggaaactttaatttcatcggtaaagcctacgatgctgatt
gtggaacacgaccgagaatttatcgagcatgtgaccaatcgcatcgtggaactggaagca
gacaaatag
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