Phocoena sinus (vaquita): 116738723
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Entry
116738723 CDS
T07759
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116738723 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116738723 (PPIL2)
03110 Chaperones and folding catalysts [BR:
psiu03110
]
116738723 (PPIL2)
04121 Ubiquitin system [BR:
psiu04121
]
116738723 (PPIL2)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
116738723 (PPIL2)
Spliceosome [BR:
psiu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116738723 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
116738723 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
116738723 (PPIL2)
Chaperones and folding catalysts [BR:
psiu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116738723 (PPIL2)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
U-box type E3
116738723 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
116738723
NCBI-ProteinID:
XP_032458272
Ensembl:
ENSPSNG00000013129
UniProt:
A0A8C9C134
LinkDB
All DBs
Position
14:63690272..63717266
Genome browser
AA seq
522 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKKPDIAQTDFRRLPFDHCSLSLQPFVYPVCTPEGVV
FDLLNIVPWLKKYGTNPSNGEKLDGRSLIKLNFAKNSEGKYHCPVLFTVFTNNSYIVAIR
TTGNVYAHEAVEQLNIKAKNFRDLLTDEPFSRQDIITLQDPTSLDKFNVSNFFHVKNNMK
IIDPDEEKAKQDPSYYLKNTNTETRETLQELYKEFKGDEMLAATMKVPEKTKVDRLNAAH
YSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNLGDLNLELHCDLT
PKTCENFIKLCKKQYYDGTLFHRSIRNFVIQGGDPTGTGTGGESYWGRPFRDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDRKHTIFGRVVGGFDTLTAMENVESDPKTD
RPKEEIRMDSTTVFVDPYEEADAKIAEERKKTRLEAAALESTAKTSQPQQGSQGPQTYRQ
GVGKYISPVVTKRVAEEEPSTSAAVPVAKKKPSRGFGDFSSW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccagaaggacaagatgtacattacctgtgctgaatacactcac
ttctatggtggcaagaaaccagatatcgcacaaacagattttcgtcgtctaccttttgac
cactgcagtctctctctacagccctttgtctacccggtctgcacccccgaaggcgtcgtc
tttgacttgctgaacattgtcccttggcttaagaagtatggcaccaaccccagcaacgga
gagaaactggacgggaggtccctgatcaagctgaactttgcaaagaacagtgaagggaag
taccactgccctgtgctgttcaccgtcttcaccaacaacagctacatcgtggccatcagg
accactggcaacgtctacgcccacgaggcggtggagcagctaaacatcaaggccaagaac
ttccgagacctgctgaccgacgagcccttctcccggcaggacatcatcaccctacaggac
cccaccagtttggacaaattcaatgtctccaacttctttcatgttaagaataacatgaaa
ataatagacccagatgaagaaaaggccaagcaggacccatcttattatttgaaaaacacg
aacacggagacccgagagacgctgcaggagctctacaaggagttcaaaggggacgagatg
ctggcggccaccatgaaggtccccgagaagacaaaggtggacaggctgaatgctgcccac
tattccaccgggaaggtcagcgcctccttcacctccactgccatggttcccgagaccacg
catgaagcagccgccattgacgaggacgtgctgcgctaccagttcgtgaagaagaagggc
tacgtgcggctgcacaccaacttgggtgacctcaacctggagctgcactgcgacctgacg
ccaaaaacctgtgagaacttcatcaagctttgtaagaagcagtactacgatggcaccctc
ttccacaggtccatccgaaacttcgtgatacagggaggtgaccccacgggcacaggcaca
gggggggagtcgtactggggaaggcccttccgagacgagttccggcccaacctctcacac
acgggccgcggcgtcctcagcatggccaactcggggcccaacaccaacaagtctcagttc
ttcatcaccttccgctcctgcgcatacctggacaggaagcacaccatcttcgggcgggtt
gtcggaggctttgacacactgacggccatggagaatgtggagagtgaccccaaaactgac
cgccctaaggaggagattcgcatggactccaccacagtgtttgtggacccctacgaggaa
gccgatgccaagatcgctgaggagcggaagaagacgcggctggaggcagcggccctggag
agcacagccaagaccagccagccccagcaggggagccagggcccccagacgtaccgccag
ggagtgggcaagtacatcagcccggtggtcacgaaacgggtagcagaggaagaaccctcc
accagtgcagctgtccccgtggccaagaaaaagcccagccgaggttttggggacttcagc
tcgtggtag
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integrated database retrieval system
