Phocoena sinus (vaquita): 116738729
Help
Entry
116738729 CDS
T07759
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116738729 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116738729 (UBE3B)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116738729 (UBE3B)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
HECT type E3
116738729 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
116738729
NCBI-ProteinID:
XP_032458287
Ensembl:
ENSPSNG00000018353
UniProt:
A0A8C9CHB9
LinkDB
All DBs
Position
14:72161374..72218773
Genome browser
AA seq
1068 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREERLVQKERERAAVEIQAHVRSFLCRRRLQREIRREIDEF
FKADDSGSSKRSALCIFKTARKLLFLFRIKEDDERFEKLCRCILSSMDVENEPKVWYVSL
ALSKDLTLLWIKQIKDVMWYCCEFLEQLKPEILQDSKLITLYLTMLVTFTDTSTWKILRG
KGESLRPAMNHICANIMGHLNQHGFYSVLQVLLTRGLARPRPCLSKGTLTAAFSLAMRPV
IAAQFSDNLIRPFLIHIVSVPALMTHLSTVTPERLTILESHDMLRKFITFLRDEDRCRDV
CESLEGCHTLCLMGNLLHLGSLSPRVLEEETDGFVSLLTQMLCYCQKYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMPLVTRQLQFLWGVPLIRIFFSDILSKKLLENQEPVHVPPASP
QNVLPVKTLLKRAFQKSASVRNILRPVGGKRVDSAEVQKVCNICVLYQTSLTTLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPHGGLKLFLECLNNDTEESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENAKGETLELFQSVHGWLMV
LYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDRKRAQLILQYTPHVVPHKNRVLLFRNM
VTKEKERLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQHVMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDI
ADLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALI
SGFRSIIKPEWTRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDIL
ASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgtttctcagacctcgagagcttggttcattgatagagcccgtcaggctcga
gaggaaaggctggtgcagaaggagcgggagagggcagctgtggagattcaggcccatgta
cggagttttctctgtcggcgtcgactgcaaagagaaatcaggagagagattgatgagttt
tttaaagcagatgactctgggtccagtaaaagaagtgcactgtgtatttttaagactgcc
aggaaactgctgttcttgttcagaattaaagaggatgatgagagatttgagaagttgtgt
cgctgcatcctgagcagcatggatgttgagaatgaacccaaggtatggtacgtgtccctg
gctctttccaaggatctcaccctcctatggattaaacagatcaaagacgttatgtggtat
tgctgtgagtttcttgagcagctcaagcctgaaattttacaagactccaaactcatcaca
ctgtacctcacgatgcttgtcacctttacagacacttcaacatggaaaattctccgggga
aaaggtgagagtcttcgaccagccatgaaccacatttgtgcaaatataatgggccatctc
aaccagcatggattttattctgtgctgcaggtattgttaacccgtggcctggcgagaccc
cggccttgtctgtccaaaggcactttaacagcagccttttccctagcaatgcgccctgtg
attgctgcacaattttcagacaatctgatccggccgttcctcatccacattgtgtctgtg
cccgctctcatgactcatctcagcacagtgacccccgagcgcctcactattttagaatct
catgacatgctccgtaaattcatcacatttttaagagacgaagatcgatgccgtgatgta
tgtgaaagtttagaaggatgccatacactttgtctcatgggcaacctcctgcacttgggc
tccctcagccccagggtgttagaggaggagacagatggatttgtgagtttgctcacccaa
atgctctgctactgtcagaagtacgtgtcccagaagaaatccaacctgacccactggcac
cctgtccttggctggttctcccaatccgtggactatggccttaacgagtccatgcccttg
gtcaccagacagctgcagttcctgtggggggtgcctctgatccggatcttcttcagtgac
atcctgagcaagaagctgctggagaaccaggagccggtccacgtgccgccagcgtcccca
cagaatgtgcttcctgtgaagactctcctgaagcgtgcatttcagaagtcggcgtcagtt
cggaatattctcaggcctgttgggggtaaacgtgttgattctgcggaggtacagaaggtt
tgcaacatctgcgtcctctaccagacctcgctgacgactctaacccagatccggctgcag
atactcacaggtctcacttaccttgatgacctgctgcccaaactttgggcgtttatctgt
gaactggggccccatggagggttaaagctcttcttggaatgcctcaacaatgacactgaa
gagtctaagcagctcttggccatgctgatgctgttctgtgactgttcccggcacctcatc
acgatccttgatgacattgaagtttatgaggaacagatttcattcaaactagaagaactg
gtcaccatctcctcttttctgaattcctttgtgtttaagatgatctgggatgggatcgta
gagaatgccaagggtgagaccttggaactgttccagtctgtccacgggtggctgatggtg
ctgtacgagcgggactgccggcggcgcttcgcccccgaggaccactggctgcgcaaggat
ctcaaacctagcgtgctcttccaggaacttgacaaggacagaaagcgggctcagctgatc
ctgcagtacaccccgcacgtcgttccccacaaaaacagagttctcctgttccgaaacatg
gtgaccaaggagaaggagagactggggcttgtggaaaccagctctgcctcccctcatgtc
actcacattaccatccgccggtcccggatgttggaggatggctatgagcaacttcggcag
ctctcccagcacgtcatgaagggcgtcatccgcgtgaagtttgtcaatgacctcggggtg
gacgaggcagggattgatcaagacggtgttttcaaggagttcttagaagagatcatcaag
agggtgtttgacccagcgctcaacctgttcaagacgaccagtggggacgagagactctac
ccttcgcccacgtcctacattcatgagaattacctgcagctgtttgagtttgtgggcaag
atgctggggaaagctgtgtatgagggaattgtggtggacgtgccctttgcatccttcttc
ctgagccagctgctcgggcaccaccacagtgtcttctacagctctgtggatgaactgcct
tctctggattccgagttctataaaaacctcacttccattaagcggtacgatggggacatt
gctgacttgggcctgacactgtcatatgatgaggatgtcatgggtcagcttgtttgccat
gaactgattcctggagggaagaccattcctgttacaaatgaaaataaaattagctacatc
catctgatggcccactttcgaatgcacactcaaatcaagaaccagacagctgccctcatt
agtggattccgttccatcatcaaacctgagtggacccggatgttctcgacccctgagcta
cagcgactcatctccggggacaatgctgagatcgatctggaagatttaaagaagcacaca
gtgtactacggtggtttccatggaagtcacagggtcattatctggctctgggatatcctg
gcctctgacttcacgcctgacgagagagccatgtttctgaagtttgtgaccagctgctcc
aggcccccgctcctgggatttgcctacctcaagcctcccttctccatccgctgtgtggaa
gtgtcggatgatcaggacaccggcgacaccctgggcagcgtcctgcgtggcttctttacc
atccgcaagcgggagccaggtggccgcctgcccacctcctccacctgcttcaacctgctc
aagctgcccaactacagcaaaaagagcgtcctgcgggagaagctgcgctacgccatcagc
atgaacacgggcttcgagctctcctag
DBGET
integrated database retrieval system
