Phocoena sinus (vaquita): 116738815
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Entry
116738815 CDS
T07759
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03082
ATP-dependent chromatin remodeling
psiu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116738815 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116738815 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116738815 (SS18)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116738815 (SS18)
GBAF(ncBAF) complex
116738815 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
116738815
NCBI-ProteinID:
XP_032458501
Ensembl:
ENSPSNG00000008316
UniProt:
A0A8C9BSI7
LinkDB
All DBs
Position
14:47801900..47878729
Genome browser
AA seq
443 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPLLLWSTGSGCAGPAAMAHRPSRSEPPTQNMPMGPGGMNQSGP
PPPPRSHNMPSDGMVAGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSS
SHGSMGGYSHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQY
NMPQGGGQHYQGQQPPMGMMGQVNQSNHMMAQRQIPPYRPPQQGPPQQYSGQEDYYGDQY
SHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDA
YQGPPPQQGYPAQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQP
GPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaacatgcagtctcttttaccagcacccctcctg
ttgtggagcacaggctccggatgcgcaggcccagcggccatggcccacaggcccagccgc
tccgagccacccacacagaatatgcctatgggtcctggagggatgaatcagagcggccct
cccccacctccacgctcacacaacatgccttcagatggaatggtagctgggggtcctcct
gcaccacacatgcagaaccagatgaacggccagatgcctgggcctaaccatatgcctatg
cagggacctggacccaatcaactcaatatgacaaacagttccatgaatatgccttcaagt
agccacgggtccatgggaggttacagccattccgtgccatcgtcccagagcatgccggta
cagaaccagatgaccatgagtcaagggcagccaatgggaaactatggccccagaccaaat
atgaatattcaaccaaaccaaggtccaatgatgcaccagcagcctccttctcaacagtac
aatatgccgcagggaggtgggcagcattaccaaggccagcagccacctatgggaatgatg
ggtcaagttaaccagagcaatcatatgatggcacagagacagattcctccctatagacca
ccacaacagggcccaccacagcagtactcaggccaggaagactattatggggaccagtac
agtcatggtggacaaggtcctccagaaggcatgaaccagcaatattaccctgatggtcat
aatgattacggttatcagcaaccgtcgtatcctgaacaaggctacgataggccttatgag
gattcctcacaacattactacgaaggagggaattcacagtatggccaacagcaagatgct
taccaaggaccacctccccaacagggatatccagcccagcagcagcagtacccagggcag
cagggctacccaggacagcagcagggctacggtccttcgcagggtggtccaggtcctcag
taccctaactacccacaggggcaagggcagcagtatggaggttacagaccagcccagcct
gggccaccccagcccccgcagcagaggccttacgggtatgaccagggacagtatggaaat
taccagcagtga
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integrated database retrieval system