Phocoena sinus (vaquita): 116738826
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Entry
116738826 CDS
T07759
Symbol
MIB1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MIB1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116738826 (MIB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116738826 (MIB1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116738826 (MIB1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116738826 (MIB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SH3_15
Ank_5
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
Ank_KRIT1
ZZ
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116738826
NCBI-ProteinID:
XP_032458528
Ensembl:
ENSPSNG00000010210
LinkDB
All DBs
Position
14:complement(51498651..51618157)
Genome browser
AA seq
1007 aa
AA seq
DB search
MSNSRNNRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVPHXSEHCPKVGIAAQGAEGGPSQFQVGDLVQVCYDLERIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLL
KKLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDI
LKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANL
DIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDL
CPDPSLCKALAKCHKEKVSGQVGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIAT
CSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQ
CRAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKE
QTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactccaggaataaccgggtgatggtggaaggggtcggggcccgagtcgtgcgc
ggcccggactggaagtgggggaagcaggacggcggcgagggccatgtgggcacggtccgg
agcttcgaaagccccgaggaggtggtggtggtgtgggacaacggcactgccgccaactac
cgctgctccggggcctacgacctgcgtatcctggacagcgcgcccacgggcatcaagcat
gatggaaccatgtgtgatacctgccgccagcaaccaatcattggcattcgatggaaatgt
gcggagtgtacaaattatgatttgtgtacagtttgttatcatggagataagcatcattta
aggcatcgcttttatagaattactacaccaggaagtgagcgggttctgttagagtctcgt
agaaaatctaagaagattacagccagagggatctttgcaggtgccagagtggtacgagga
gtggactggcagtgggaagatcaggatggaggaaatggacgtaggggaaaggtaacagaa
atccaagactggagtgcatcaagcccacatagtgcggcctacgttctctgggacaatggt
gctaagaacctttacagagttggctttgagggcatgtctgacttgaagtgtgtccaggat
gccaaaggaggttctttctacagagatcattgtcctgtgctaggtgagcagaatggcaac
aggaatcctggtggattgcagattggtgacctggtcaatatagatcttgacctagaaatt
gtacagtctttgcagcacggtcatggaggatggactgatggcatgtttgagactttaact
acaactggaactgtttgtggcattgatgaagatcatgacattgtagtacagtatccaagt
ggcaataggtggaccttcaatcctgctgttcctcactaaagcgaacattgtccgaaggtg
gggattgctgctcagggtgcagaaggaggcccctcacagttccaagtgggtgatcttgta
caagtttgttatgacctggaaagaattaaacttctacagagaggacatggagaatgggct
gaagctatgctcccaactttaggtaaagttggccgagtacaacagatttattcagacagt
gatttaaaggtggaagtctgtggaacatcttggacatataatccagcagcagtttccaag
gtggcatctgcaggatcagccattagcaatgcatctggtgaaagactctcccaactcttg
aagaaattatttgaaacccaagaatctggtgacctcaatgaagaattagttaaggctgct
gccaatggagatgttgctaaagtggaagatttgctaaaaagaccagatgtggatgtgaat
ggacagtgtgctggtcacacagccatgcaagctgctagtcagaatggacatgttgacatt
ttgaagttgcttttgaagcaaaatgtggatgtagaagcagaggataaagatggagataga
gccgttcaccatgcagcttttggagatgaaggcgctgttatagaagtgctgcaccgaggc
agtgctgatctgaatgcacgaaacaagcgccggcagacaccacttcatattgctgtcaat
aaaggtcaccttcaagtggtgaagactttattggactttggctgtcatcccagtcttcag
gattctgaaggtgatacccctcttcatgatgcaataagtaagaaacgtgatgatatcctg
gcagttcttctggaagctggagcagatgttaccattacaaataataatggatttaatgct
ctacaccatgctgcactaagaggaaatcccagtgcaatgcgtgttttactgtcgaaatta
ccaagaccgtggattgtggatgagaagaaagatgatggttatactgccttgcatctggct
gccctcaataatcatgtagaagtggctgaactgttggtacatcagggtaacgcaaacctg
gatatccagaatgtgaaccagcagactgccctacaccttgctgttgagcggcagcacacc
cagattgtgaggctcttggtccgtgcaggtgccaaattagatattcaggataaggatggg
gatactcctttgcatgaagctctgaggcatcacactttgtctcagctacgtcagcttcaa
gatatgcaagatgtggggaaggtcgatgctgcctgggagccatccaaaaacaccttaata
atgggacttggtacccagggagccgagaagaagagtgcagcatctattgcctgttttttg
gctgctaatggcgctgaccttagcattcgaaataagaagggtcagtcgccacttgatctc
tgtcctgatccaagtctctgcaaggcactggcaaagtgtcataaagaaaaagtcagtggt
caggtgggttctcgaagtccttctatgattagtaatgattctgaaaccttagaagagtgt
atggtgtgctcagatatgaagagagatactctttttggcccatgtggacatattgctacc
tgttctttgtgttctccacgagtcaagaaatgcctcatctgtaaagaacaagttcaatcc
aggacaaagattgaagaatgtgtggtatgttctgacaagaaagcagctgttctttttcag
ccttgcggacacatgtgtgcttgtgagaactgtgctaatctgatgaaaaagtgtgtgcag
tgtcgggcagtagttgaacgaagagtgcccttcatcatgtgttgtggagggaaaagttca
gaagatgccactgatgatatctcaagtgggaatattccggtgttacaaaaggataaggat
aacaccaacgtcaatgcagacgtgcagaagctgcagcagcagttacaggacattaaagag
cagacaatgtgccctgtgtgtttggatcgtctgaagaatatgattttcctttgtggccat
ggtacgtgccagctctgtggagaccgaatgagtgaatgtcctatttgtcgaaaggctatt
gaacgaaggattcttttgtattaa
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integrated database retrieval system
