Phocoena sinus (vaquita): 116738850
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Entry
116738850 CDS
T07759
Symbol
CDH20
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116738850 (CDH20)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Major cadherins
116738850 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
116738850
NCBI-ProteinID:
XP_032458605
Ensembl:
ENSPSNG00000020274
UniProt:
A0A8C9CX11
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Position
14:complement(13841756..14050680)
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AA seq
801 aa
AA seq
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MWTSGRMSNAKSWLGLGMSLYFWGLMDLTTTVLSGTPTPPGKLEAFLSDKPQSHSRTKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGVVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVMYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPVSSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFNINTDPHFQVGIITVKKPLSFETKKSYTLKVEGANPHL
EMRFLNLGPFQDTTTVHISVEDVDEPPVFEPGSYFVEVPEDVAIGTTIQIISAKDPDVTN
NSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVPV
TIKVLDVNDNAPKFPRFYEAFVCENAKAGQLIQTVSAVDQDDPRNGQHFYYSLAPEAANN
PNFTVRDNQDNTARILTRRSGFRQQEQSVFYLPVLISDNGQPVLSSTGTLTIQVCSCDDN
SHVLSCSPEAYMLPVRLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDDEENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGGASKTRQDMLPEIESLSRYVPQTCAVNS
TVHSYVLAKLYEADMDLWAAPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQSFDFLTDW
GPRFRKLAELYGASEGPAPLW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttctggtagaatgagcaatgcaaagagctggcttggacttggcatgtccttg
tacttctggggattgatggaccttacaaccactgttctctcgggcacaccaacaccgcca
ggcaaattagaagcgttcctgtcagacaagccacagtcacactctcggacaaagaggagc
tgggtttggaaccaattttttgttctggaagaatacactggaactgaccctttgtatgtc
ggcaagcttcattcagacatggaccggggggatggatccatcaaatacatcctctctgga
gaaggtgcaggtgtcgtgtttaccatcgacgacaccactggagacatccatgccattcag
aggcttgaccgagaggaaagggcccagtacactttaagggctcaagccctggacaggcgg
acgggcaggccaatggagccagagtcagagttcatcattaaaatccaagacatcaatgac
aatgagcccaagttcctggatggaccttatgtcgccactgtaccagaaatgtcaccagtg
ggaacttctgttatccaggtgacagccacagatgctgatgacccaacctatggcaacagt
gcccgggtaatgtacagcatcctccagggccagccatatttttctgtggactccaaaaca
ggtgtaattaggacagcactcatgaacatggaccgagaagccaaagaatactacgaagtg
attattcaagccaaggacatgggagggcagcttggcggattagctgggaccacaacggtc
aacatcaccctctcagatgtcaatgataacccaccccgctttccccagaaacattatcag
atgagtgtgttggaatcagctccggttagctctactgtgggaagggtgtttgccaaggac
ttggatgaaggaattaatgcagagatgaagtacactattgtggatggagatggtgcagat
gcattcaacattaacacagatccccatttccaagtcggcatcataactgtgaagaagccc
ctgagttttgaaaccaagaaaagctacaccttaaaagtggagggagccaatcctcaccta
gagatgcgttttctgaacctaggcccatttcaggacacaaccacagtgcacatcagtgtg
gaagatgtggatgagccccctgtgtttgaacctggctcttattttgtggaggtacctgaa
gatgtggcaattggaacaaccatacagatcatttctgccaaggatccagatgtgaccaac
aactcaatcagatattccattgacagaagcagtgaccctggaaggttcttctatgttgac
attacaacaggtgccctaatgactgcgagaccccttgaccgagaagagttttcttggcat
aatatcactgtccttgctatggaaatgaacaatccttcccaggttggaagcgttcctgtc
acaatcaaagtcttagatgtgaatgacaatgctccaaagttccccagattctatgaagct
tttgtctgtgagaatgccaaagcagggcagctgatccagacagtgagcgcagtggaccaa
gatgacccacgcaatggccagcacttctactacagcttggctcctgaggctgctaacaac
cccaacttcaccgtaagggacaaccaagataacactgcccggattctaactaggaggtct
ggcttccggcagcaggagcagagtgtcttttacctgcccgtcctgatatcggacaatggg
cagccggtgctgagcagcacgggcacgctgactatccaggtgtgcagctgtgacgacaac
agccacgtcctgtcctgcagccccgaggcctacatgctcccagtcagactgagccgcggc
gccctcattgccatcctggcctgcatctttgtcctcttagtgctggtgctgctcatcctg
tccatgcggaggcaccggaagcagccatacatcatcgacgacgaggagaacatccacgag
aacatcgtgcgctacgacgacgagggcggtggcgaggaggacaccgaggccttcgacatc
gcagccatgtggaacccacgggaggcgcaggcgggcggcgcctccaagacgcggcaggac
atgctgcccgagatcgagagcctctcccgctacgtgcctcagacgtgcgccgtcaacagc
accgtccacagctacgtcctggccaaactctacgaggccgacatggacctgtgggccgcg
cccttcgactccctgcaaacgtacatgttcgagggggacggctcggtcgccgggtctcta
agctccctgcagtcggccacttcagactcggagcagagcttcgacttcctgacggactgg
ggaccccgcttccggaagctggcggagctctacggggcgtcggaggggcccgcgcccctg
tggtga
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