Phocoena sinus (vaquita): 116738851
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Entry
116738851 CDS
T07759
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116738851 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116738851 (MSI1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116738851 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
116738851
NCBI-ProteinID:
XP_032458606
Ensembl:
ENSPSNG00000006799
UniProt:
A0A8C9BMK4
LinkDB
All DBs
Position
14:73167855..73190384
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AA seq
362 aa
AA seq
DB search
METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGST
PSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNG
YH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagactgacgcgccccagcccggcctcgcctccccggactcgccgcacgacccctgc
aagatgttcatcgggggactcagttggcagactacgcaggaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccccctgaccaaaagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtactggcgcaa
tcgcggcacgagctcgactccaaaacaattgatcccaaggtggcctttcctcggcgagca
cagcctaagatggtgactcgaacgaagaagatctttgttggggggctgtcagtaaacacc
acggtggaagacgtgaagcagtattttgagcagtttgggaaggtggacgatgccatgctg
atgtttgacaaaaccaccaaccggcaccgagggttcggctttgtcacgtttgagagcgag
gacatcgtggagaaagtgtgtgaaatccacttccacgaaatcaacaacaaaatggtggaa
tgtaagaaagctcagccaaaagaggtgatgtcaccgactggctcggcccgggggaggtct
cgagtcatgccctatggaatggacgccttcatgctgggcatcggcatgctgggttaccct
ggtttccaagccacgacctatgccagccggagttatacaggcctcgcccctggctacacc
taccagttccccgaattccgtgtagagcggacccctctcccgagcgccccagtcctcccc
gagcttacagccattcctctcactgcttatggacccatggcagcggcagcggcagcagca
gctgtggttcgagggacaggctctcacccctggacgatggctccccctccaggttcaact
cccagccgcacagggggcttcctggggaccaccagcccgggccccatggccgagctctat
ggggcagccaaccaggactcgggggtcagcagttacatcagcgctgccagccccgccccc
agcactggctttggccacagtcttgggggccccttgattgccacagctttcaccaatggg
taccactga
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