Phocoena sinus (vaquita): 116738886
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Entry
116738886 CDS
T07759
Symbol
CDH19
Name
(RefSeq) cadherin-19 isoform X1
KO
K06806
cadherin 19, type 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116738886 (CDH19)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Major cadherins
116738886 (CDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
DUF443
Motif
Other DBs
NCBI-GeneID:
116738886
NCBI-ProteinID:
XP_032458672
Ensembl:
ENSPSNG00000017916
UniProt:
A0A8C9CXL4
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Position
14:10179213..10229480
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AA seq
770 aa
AA seq
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MNCCLLLPYMLGIPLLLPCLIATENSKTEEVKHPAGSHLRVRRGWMWNQFFVPEEMNKTR
HHIGQLRSDLDNGNNSFQYKLLGAGAGSIFVIDERTGDIYAVQKLDREERSLYTLRAQVI
DTTTGRAMEPESEFVIRVSDINDNEPKFLDEPYEAIVPEMSPEGTFVIQVTASDADDPSS
GNNARLLYSLRQGQPYFSIEPTTGVIRISSKMDRELQDEYWVIIQAKDMIGLPGALSGTT
SVLIKLSDVNDNKPIFKDSLYRLTVSESASVGMSIGKIMAYDNDIGENAEMDYSIEDDSK
TFDVITNNETQEGIIILKKKVDFEHQNHYRIRAKVKNRRVDEQLRKYHTEASTTVIKIQV
EDVEEPPVFLLPYYIFEIFEGSPYGSFVGTVSATDPDQRKSPIRYSITRSKVFSIDDNGT
VFTTNSLDREISAWYNLSVTATEKYSIQQSSAVPVYVQVLDINDHAPEFPEYYETYVCEN
AVSGQVIQTISAVDRDESIEDHHFYFNVSVVENNSSFTIIDNQDNTAVILTNRTGFSLQE
EPVFYISILIADNGIPSLTSTNTLTIHVCACDDTGSTQTCSNKDLMLSMGFRTEVIIAIL
ICIMIICGFIFLNLGLKQRRKQTLFPEKGEDFRENIFRYDDEGGGEEDTEAFDIVELQGG
TVMQERKTRRATRVEIRSLYRQSLQVGPDSAVFRKFILEKLEEANTDPCAPPFDSLQTYA
FEGTGSLAGSLSSLGSAVFDQDENYDYLNELGPRFKRLACMFGSAMQSNN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaattgctgcttattgctgccttatatgttgggaattcctctcctattgccttgcctt
atagcaacagaaaactctaaaacagaggaagttaagcacccagcgggatctcatttgaga
gtgaggcggggctggatgtggaaccagttttttgtaccagaagaaatgaataagactaga
catcacattggccagctaagatctgatttagacaatggaaacaactctttccagtacaag
cttttgggagctggagctggaagtatttttgtcattgatgaaagaacaggtgacatatat
gctgtacagaagcttgatagagaggaacggtccctctacactctaagagcccaggtaata
gacaccactactggaagggctatggaacctgagtctgagtttgtcatcagagtgtcggat
atcaatgacaatgaaccaaaattcctagatgaaccttatgaggccattgtaccagagatg
tctccagaaggaacatttgtcatccaggtgacagcaagtgatgctgatgacccttcaagt
ggcaataatgctcgtctcctgtacagcttacgacaaggccaaccatatttctccattgaa
ccaacaacaggagtcataagaatatcttctaaaatggatagagaactgcaagatgagtat
tgggtgattattcaagccaaagacatgattggtctgcctggagcactgtctggaacgaca
agtgtattaatcaaactttctgatgttaatgacaataagcctatatttaaagacagttta
tatcgcttgactgtctctgaatctgcatctgttgggatgtcgattggaaaaatcatggcg
tatgataatgacataggagagaatgcagaaatggattacagcatagaagatgattcaaaa
acgttcgatgtcattactaataacgagacccaagaaggaataattatattaaaaaagaaa
gtagactttgaacaccagaaccactatcgtattagagcaaaagttaaaaaccgccgagtt
gatgagcagctcaggaaataccatactgaagcttccaccactgtcatcaagatccaggtg
gaagatgttgaggaacctcctgttttcctcctcccgtattacatatttgaaatctttgaa
ggaagcccgtatggatcatttgtaggcaccgtctctgccacagatccagatcagaggaaa
tctcctatcaggtattctattaccagaagcaaagtgttcagcattgatgacaatggtaca
gtcttcacaactaactctcttgatcgagagattagtgcttggtataacctaagtgttaca
gccacagaaaaatacagtatacaacagagttctgcagtccctgtgtatgtgcaagttctc
gatatcaatgatcatgctcctgagttccccgaatactatgagacttatgtttgtgaaaat
gcagtctctggccaggtgattcagaccatcagtgcagtggatagagatgaatccatagaa
gatcaccacttttactttaatgtatctgtggtagaaaataactcaagttttacaatcata
gataatcaagataacacagctgtaattttgactaatagaactggtttcagccttcaagaa
gagcctgtcttctacatatccatcctaattgctgacaatggaatcccatcacttacaagc
acaaacacccttaccatacatgtctgtgcctgtgatgacactggtagcacgcagacctgc
agtaataaagatcttatgctttccatgggattcaggacagaagtcataattgctattctg
atatgcattatgataatatgtgggtttatttttttgaacctaggtctgaaacaacgaagg
aaacagactctatttcctgagaaaggtgaagatttcagagagaatatattcagatatgat
gatgaaggtggcggagaggaggatacagaggcatttgacatagtggagctgcagggtggc
acagtcatgcaggaacgcaagactcggagagccaccagggtagaaattcggagcctgtac
aggcagtctttgcaggttggcccagatagtgccgtattcaggaaattcattctagaaaag
ctcgaagaggctaacactgatccctgtgcccctccttttgactccctccagacctatgct
tttgaggggacagggtccttagctggatccctgagctctttagggtcagcagtctttgat
caggatgaaaactatgattaccttaatgaattgggacctcgctttaaaagattagcatgc
atgtttggttcggctatgcagtcaaataattag
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