KEGG   Phocoena sinus (vaquita): 116738897
Entry
116738897         CDS       T07759                                 
Symbol
DSG1
Name
(RefSeq) desmoglein-1
  KO
K07596  desmoglein 1
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04382  Cornified envelope formation
psiu05150  Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116738897 (DSG1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    116738897 (DSG1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:psiu04515]
    116738897 (DSG1)
Cell adhesion molecules [BR:psiu04515]
 Cadherins
  Major cadherins
   116738897 (DSG1)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_FAT4_N TFIIF_beta_N
Other DBs
NCBI-GeneID: 116738897
NCBI-ProteinID: XP_032458687
Ensembl: ENSPSNG00000007476
LinkDB
Position
14:complement(43598549..43636263)
AA seq 1040 aa
MNWPFFRTAAVLFIFLVVLEVNSEFQIQVRDYNSKNGTIKWRSIRRQKREWIKFAAACRE
GEDNSKRNPIAKIHSDCAANQQVTYRISGVGIDQPPYGIFVINQKTGEINITSIVDREVT
PFFIIYCRAVNSLGQDLEKILELRVRVLDINDNPPVFSMSTFLGQIEENSNANTLVMMLN
ATDADEPNNLNSKIAFKIVRQEPSDSPMFIINRYTAEIRTMNNFLDREQYGQYSLVVRGS
DRDGGADGMAAECECSIKILDVNDNIPYMEQSSYSISIEENALNSNLLQIRIIDLDEEFS
ANWMAVIFFISGNEGNWFEIEMNERTNVGTLKVIKALDYEATKNLQLSLGVRNKVEFHQS
IKSQYKLTATAVSVTVLNVVEGSVFRPGSKTFVVTSAMGQNYKLGDFIATDLDTGLPSTT
VRYVMGSNPTGLITIDSKTGIIILRNKVTVQQYEILRGKYQGTILSIDDALQKTSTGTII
IKLESDSKGGDAPSNDNNTSTSTNGLTSSDVTTDTYKNANTFDVGGTTAFHLVIKDNVYF
GPAGIGLLIMGFLILGLVPFLLMFCDCGGVPGCRASFKPVPECTDGAMHSWAVEGPQPKL
VDLTNIGAPQIPPNNADIIDCIDNSGVYTNEYHGRKMQDLGGGERTTALELVDGVKTSGQ
PKICQEYSGTLRSSMRECREGGLNMNFMESYFCQKAYAYADEDEARPSNDCLLIYDIEGV
GSPAGSVGCCSFIGEDLDDSFLDTLGPKFKKLADISLGKGVEPYPDLDPSWPPDSTEPIC
PLQGTEPTGSGHPHTSPHFGTTTIISESNYPSGPGVQHPIPDPLGYGNVTLTESYTTLGT
LKPSVHVHDNRHASNVVVTERVVGPISGANLHGMLEMPDLRDGSNVIVTERVITPGSSLP
STLTIPDPRESSNVVVTERVIQPTSGLVGNLSVHPNLSNTHNVVVTEKVVSGSGMTGISG
PAGLGGGSGIGSSGLVGSGGGIGLSSLGGGGGLSSSIGGTSTIGHLRGSSEHHFSNTLGS
ASPITARSRITKYSTGQYTK
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgaactggcccttcttcagaacagctgcagtgctgttcattttcctggtggtgctggaa
gttaacagtgaatttcaaatccaggtcagagattataacagtaaaaatggcaccatcaag
tggcggtccatcaggaggcaaaaacgtgagtggatcaagttcgctgcagcctgccgtgaa
ggtgaggacaactcaaagaggaacccaatcgccaaaattcactcagattgtgctgcaaac
cagcaagttacataccgcatctccggagtaggaattgatcaaccaccttacggaatcttt
gttattaaccaaaaaactggtgaaattaatataacatccatagttgatcgagaggtcacc
ccttttttcattatctattgtcgggctgtgaattcactgggtcaggatttagagaaaatt
ctcgagctcagagtcagggttttggatataaatgacaaccctccggtattttctatgtct
acgtttctaggacaaatagaagaaaattctaatgccaatacactggtgatgatgctcaat
gctactgatgcagatgaaccaaataatttgaactcaaaaatagccttcaagatcgtaaga
caagaaccttctgattcaccaatgtttattatcaacagatacactgcagaaattcgaaca
atgaataattttctggacagagagcaatatggccagtactctctagttgtaagaggctca
gaccgcgatggtggggcagatggtatggcagcagagtgtgaatgcagcattaaaatcctc
gatgtcaatgataacatcccatacatggaacagtcatcatattccataagtattgaagaa
aatgctctaaattcaaatttgctccagattagaataattgatttggatgaggagttctca
gctaactggatggcagtcattttctttatctctggaaatgagggaaattggtttgaaata
gaaatgaatgaaagaacaaatgtgggaactttaaaggttattaaggccctagattatgaa
gctacgaagaatcttcaacttagtcttggtgttagaaataaagttgaatttcatcaatca
attaagtctcaatataaactcacagcaactgcagtctctgtgactgtgttaaacgtagtt
gaaggctcagtgttccgtccaggttcaaagacattcgtagtaactagtgcgatgggacaa
aactataaattgggagactttatagctactgatctggacacaggtctaccttcaaccact
gttagatatgtaatgggaagtaatccaacgggcctaatcactattgactcaaaaacgggc
atcattattttgagaaataaagttactgttcaacaatatgaaatacttaggggaaaatac
caaggaacaattctatctatagatgatgctcttcaaaaaacttctactggtacaattatt
attaaacttgaaagtgattccaagggaggtgatgcaccgtctaatgataataataccagt
actagcacaaatggccttacttcctcagatgttaccactgatacctacaaaaacgcaaat
acttttgatgtaggtggcaccaccgcttttcatctagtaataaaggataatgtatatttt
ggtcctgctggcattggactactcatcatgggattcttgatccttggattggtcccattt
ttgttgatgttttgtgactgtggaggtgtccctggttgtagggccagctttaagcctgtt
cccgaatgtacggatggagcaatgcattcatgggcggtggaaggaccacagcccaaactt
gtggatttgaccaatatcggtgcaccacaaataccacccaataatgcagatattatcgac
tgcattgacaactcaggggtttacacaaatgagtatcatggcagaaaaatgcaagatctt
ggaggaggagaaagaacgacagcattggaactggtggatggagttaaaacatcaggacaa
cctaagatatgtcaagaatattctggaacattaagaagttctatgagggaatgtagagaa
ggagggctgaatatgaacttcatggaaagttacttctgccagaaagcatacgcttatgca
gatgaagacgaagcacgcccatccaatgactgtttgctcatatatgatattgaaggtgta
ggttcccctgcgggctctgtgggttgttgtagcttcattggagaagacttggatgacagc
tttttggatacactggggcctaaatttaagaagttggcagatatcagcctgggaaaagga
gtggaaccatatccagaccttgatccctcttggccacctgacagcactgaaccgatctgc
cctctgcagggaacagagcccactggtagtggacacccacacacctccccacatttcggc
accaccaccatcatttctgagagtaactacccctcgggacctggggtacagcatcctatt
cctgatcctctgggctatggtaatgtcactttaactgagtcttacaccaccttgggcact
ctgaagccctctgtccacgttcacgataaccgacatgcatcaaacgtggtggtgacagag
agggtggtcggcccaatctctggtgccaatctgcatgggatgttagagatgcctgacttg
agagatgggtcaaatgttatagtgacagaaagggtaataacacctggttcgagcctgccc
tccactttgaccatccctgatcctagagagtcttcaaatgtagtagtgacagaaagagta
atccagccaacttccggcctagtgggcaatctgagtgtgcaccccaatttatcaaacacc
cacaatgtggttgtgacagagaaggtagtttcaggctccggcatgactggcattagtggc
ccagctgggctaggtggaggcagtggcataggcagcagtggcctggtgggcagtggtggt
ggcattgggctgagcagtctgggagggggcgggggcctgagtagcagcatcgggggcaca
tccaccattggccacttgaggggctcctctgagcatcactttagcaataccctaggatct
gcctcccctatcacagcccgaagtcgaatcacaaagtacagtacaggacaatataccaag
tag

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