Phocoena sinus (vaquita): 116738926
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Entry
116738926 CDS
T07759
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116738926 (LOXHD1)
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116738926 (LOXHD1)
Cilium and associated proteins [BR:
psiu03037
]
Other cilia and associated proteins
Stereociliary proteins
116738926 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Other domain-containing proteins
Others
116738926 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
116738926
NCBI-ProteinID:
XP_032458735
Ensembl:
ENSPSNG00000011419
UniProt:
A0A8C9C1E4
LinkDB
All DBs
Position
14:26959690..27159586
Genome browser
AA seq
2214 aa
AA seq
DB search
MMPQKRKRRKEDIDFLALYEQELLDYALEDDEEELQHEYYKAKVYEVITATGDVRGAGTN
ANVFITIFGENGLSPKLHLTSKSESAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGSNAS
WYLDRVIVTDMKRPHLRYYFNCNNWLSKVEGDRQLCRDLLASFNPMDVPRGNKYEVKLYT
GDVIGAGTDADIFINIFGEYGDTGERRLENEKDNFEKGAEDKFTVDAPDLGQLMKISVGH
NNKGPSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAISYIV
TVFTGDVRGAGTKSKIYLVMFGARGNKNSGKIFLEGGVFDRGRRDIFNIELAVLLSPLSR
VSIGHGNVGANRGWYCEKVVILCPFTGIQQTFPCSSWLDEKKTDGLIERQLYEMVSLRKK
RLKKFPWSLWVWTTDLKKAGTNSPIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIEL
PDLGRFYKIRAWHDKRSPGSGWHLERMTLMNTLTKDKYNFNCNRWLDANEDDNEIVREMT
AEGPTVRRIMGMARYRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFV
KGNADEFTIESVTMRKVRRVRVRHDGKGSGSGWFLDRVLVREEGQPESDNVEFPCLRWLD
KDKDDGQLVRELLPSDSNATLKNFRYHISLKTGDLPGASTDSTVYIKLYGDKSDTIKQDL
LVSDNNLKDYFERDRVDEFTLETLNIGPINRLVIGHDGTGMNASWFLGSIQIHVPRQGKQ
YIFPANRWLDKNKADGRLEVELYPSDVVDIQKLIHYEVEIWTGDVGGASTTARVYMQIYG
EEGKTEVLFLSSRSKVFERASKDTFQLEAADVGQVFKIRLGHTGEGFSPSWFVDTVWLRH
TAVREEDLTPEEEARRKKEKDKLRQLLKKERLKAKLQRKKKKKKGSDEEDEGDEEEESSS
EESSSEEEDEETEEEEEEEEFGPGMQEVIEEYKFDAHRWLARGKEDNELVVELVPAGREG
PEPNTYEVQVITGSVPKAGTDANVFLTIYGEEYGDTGERTLKKSDKSNKFEQGQTDTFTI
YAIDLGPLTKIRIRHDNSGNRPGWFLDRIDIIDMNNEITYYFPCQRWLAVEEDDGQLSRE
LLPVDESYVLPPSEDEEGGGDDSNPLDNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFI
TLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKAPGWFV
DWVEVDAPSLGRCMTFPCGRWLAKSEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDV
FAAGTDANIFIIIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIMELEDVGEIIEKIR
IGHDNTGINPGWHCSHVDIRRILPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFT
EKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLG
KSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKLCADWYVEKVEIWNDTNEDEFL
FLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEITLSSKMADIDIATVTGPM
ADYVQEGPVIPYYVSVTTGKQKDAATDSRAFIFLIGEDDERSNRIWLDYPRGKKGFSCGS
VEEFYVAGLDVGVIKKIEVLYEMTVWTGDVVGGGTDSNIFMTLYGTNGSTEEVQLDKKKA
RFEREQNDTFIMEILDIAPFTKMRIRIDGLGSRPEWFLERILLKNMNTGDLTMFYYGDWL
SQRKGKKTLVCEMCAVIDGEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGPL
ALKQSANWNKFERNSTDTFNFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDE
TFRFQCDCWLSKNEGDRQTVRDFPCANNEIHDELEETTYEIIIETGNGGETRENVWLILE
GRKNRSKEFLVENSSRQRAFRKGTTDIFEFDSVYLGDIASLCVGHLAREDRFIPKRELVW
HVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVLVKYEVI
VTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDHFFLETLELGELRKV
RLEHDSSGYSSGWLVEKVEVTNTSTGVATIFTCGRWMDQKRGDGLTWRDLFPSV
NT seq
6645 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccagaagagaaagaggaggaaggaggacatcgactttctagccctgtatgag
caggagctgctggactacgccttggaagacgacgaagaggagctgcagcacgagtactac
aaggccaaagtgtacgaggtgatcacagccacgggggatgttcgtggcgcagggaccaat
gccaatgtcttcatcaccatttttggagagaatgggctctctcccaagctccatcttacc
agcaagagcgaatctgcctttgagaaagccaacgtcgatgtgttccgggtgagaaccaat
aacgtgggcctcatctacaaaatcaggatcgagcatgacaacacaggctcgaacgccagc
tggtacctggaccgtgtgattgtgaccgacatgaagcggcctcacctccgttactacttc
aactgcaacaactggctgagcaaggtggagggtgaccgccagttgtgtcgcgacctgttg
gccagcttcaaccccatggacgtgcccagaggtaacaagtatgaagtcaagctgtacact
ggtgatgtcattggtgcagggactgatgctgacatcttcatcaatatctttggagagtat
ggagacacaggtgagcgtaggctggagaatgaaaaggacaactttgaaaagggagcggaa
gacaagttcacagtggatgccccggatctggggcagctcatgaagatcagtgttggccac
aataacaaggggccgtctgcaggctggttcctgtcaaagattgtcattgaagatattggg
aataaaagaaaatatgatttccctcttaaccgctggctggccttggatgaagacgatggc
aaaattcagagggatatcttagtgggcggagctgagaccacagccatctcatatattgtc
accgtcttcactggggatgtccggggtgctgggaccaaatccaaaatctacctggtcatg
ttcggggccagagggaataagaacagtgggaaaatcttcctggagggcggtgtgtttgac
cgtggccgcagagacatcttcaacatcgagctggctgtcctcctcagcccattgagccgg
gtctccatcggacatggcaatgtgggagccaatagaggctggtactgtgagaaggtggtg
attttgtgccccttcactggcatccagcagaccttcccttgcagcagctggctggatgag
aagaagacagatgggctgatcgagaggcagctctacgagatggtgtctctcaggaagaag
aggctgaaaaaattcccgtggtccctgtgggtctggacgaccgacttgaagaaagctggt
accaactctcctatcttcatccagatttacgggcagaaggggcggacagatgagattctc
ctgaatcccaacaacaagtggttcaaacccggaataattgagaaatttaggattgagctc
ccagacctcggcaggttttataagattcgggcgtggcatgataaaaggagtcctggttct
ggatggcatttagaaaggatgaccctgatgaacaccctgaccaaggacaagtataacttc
aactgcaatcgctggctggatgccaacgaggatgacaatgagatcgttagggaaatgact
gccgagggtccaacagtacggaggataatgggcatggcccggtaccgcgtgacagtgtgc
actggggaacttgaaggtgcgggaacggatgccaacgtctacctctgcctttttggtgat
gtgggggacacgggggagcggctgctctacaactgcaggaataacaccgacctgtttgtg
aagggcaacgccgatgagttcaccattgagtccgtcaccatgcggaaggtaaggcgggtg
agggtcagacacgacggcaaaggcagcggcagtggctggttcctggatcgggtgctggtg
agagaggaggggcagcctgagagcgacaacgtggagttcccttgtctcaggtggttggac
aaggataaggatgatgggcagttggtccgagagttgctgcccagcgacagcaatgcgaca
ctgaagaacttccgctatcacatcagcctgaagactggggacctccctggggccagcaca
gattccacagtctacatcaagctctatggggacaaatctgacaccatcaagcaagatctt
cttgtatctgacaacaacctgaaagactactttgaacgtgaccgggtggatgagttcacc
ctggagaccctgaacattggacccatcaaccggctggtgatcgggcacgacggcacgggc
atgaatgccagctggttcctgggcagcatccagatccacgtgccccgccaaggcaagcag
tacatcttccctgccaaccgctggctggataagaacaaggccgatgggcgcctggaggtg
gagctgtaccccagcgatgtcgtggacatccagaaattgatccactacgaggttgagatt
tggacaggggatgtgggcggcgcaagcaccactgcccgagtctacatgcagatctacggc
gaggaaggcaagacagaagtgctcttcctctccagccgctcaaaagtgtttgagcgggca
tccaaggacacattccagctggaggcggcggacgtgggccaggtcttcaagatccggctc
ggccacacgggcgagggcttcagccccagctggttcgtggacaccgtgtggctgcggcac
acggcagtgcgggaggaggacctcacgcccgaggaggaggcgcggaggaagaaggagaag
gacaagttgcggcagctgctcaaaaaggagcgtctgaaggccaagctgcagaggaagaag
aagaagaagaagggcagcgacgaggaggacgagggggacgaggaggaagagtcctcgtcg
gaggagtcctcgtcggaggaggaggacgaggagaccgaggaggaggaggaggaggaggaa
tttggacccgggatgcaggaggtgatcgaggagtacaagttcgacgcccaccgctggctg
gcccggggcaaggaggacaatgaacttgtcgtggagctggtgcccgcaggccgagagggt
cccgagcccaacacctacgaggtccaggtgatcacggggagtgtgcccaaggctggcacc
gatgccaatgtcttcctgaccatctacggggaggaatatggggacacgggagagcggacc
ctaaagaagtcggacaagtccaacaagtttgagcaggggcagacagacaccttcaccatc
tacgccattgaccttggccccctgaccaagattcggattcgccatgacaactcgggcaac
agaccaggctggttcctggacagaatagacatcattgacatgaacaacgagatcacgtac
tactttccgtgccagcgctggctggcagtggaggaggatgatggccagctgtccagggag
ctgttgccagtggatgagtcctatgtgctgccaccaagcgaggatgaggagggtggggga
gatgacagcaaccccctcgacaacctggccctggagcagaaagataaatctaccacattc
tcagtgaccataaagaccggggacaagaagaatgcgggcaccgatgccaatgtcttcatc
acactctttggcactcaagatgacactggaatgaccctcctgaaatcctccaagacaaac
agtgacaagtttgagagggacagcatcgaaatcttcacagtggagaccctggacctggga
gatctgtggaaagtcaggatcggccatgacaacacaggcaaggctccaggctggtttgta
gactgggtagaggtggacgccccatcccttggaaggtgcatgacattcccctgtggccgc
tggttggccaagagtgaagacgatggtgccatcgtcagggacctcttccacgcggaactt
cagacaaggctgtatacaccatttgtcccttacgagatcaccctctacaccagtgatgtc
tttgccgctgggacagacgcaaacatcttcatcatcatctatggctgcgatgctgtgtgc
acccagcagaagtacctatgcaccaacaagagggagcagaagctgttctttgagaggaag
tccgcctcccgcttcataatggagttagaagacgtgggagaaatcattgaaaaaattcgg
attggccatgataatacgggtataaatcctggttggcactgctcccacgtggacatccgc
aggatcctcccagataaagatggcacagagaccttgaccttcccttgtgatcgatggctt
gccacctcagaggacgacaagaagaccattcgagaactggtcccttatgatatcttcact
gagaaatacatgaaagatgggtctttaaggcaagtctacaaggaagtggaagagcctctg
gacattgtgctgtactcggtgcagatcttcacaggaaacgttcccggggcagggacggac
gccaaggtctacatcaccatctatggagacctcggggacacgggagagcggtacctcggc
aagtctgagaaccgcaccaacaaattcgagagaggaacggccgacaccttcatcatcgag
gctgctgacctgggtgtcatctacaagatcaagctccgccacgacaacaccaaattgtgt
gcagactggtacgtggagaaggtggagatctggaacgacaccaacgaggacgagttcctg
ttcctgtgcgggcgctggctgtccctgaagaaggaggacgggcggctcgagaggctcttt
tatgagaaggagtacactggggaccggagcagcaactgcagcagccccgctgacttctgg
gagatcaccctgagctccaagatggccgatatcgacatcgccacagtgacagggcccatg
gctgactacgttcaggaaggcccagttattccctactatgtgtcagtcaccacggggaag
cagaaggacgcagccaccgacagcagggccttcatcttcctcatcggagaggatgacgag
cgcagtaaccgcatctggctggactatccccgagggaagaagggcttcagctgcggctca
gtggaggagttctatgttgcaggcttggatgtgggcgttatcaagaaaatagaggtgctg
tatgaaatgacggtgtggacgggtgatgtggttggtggtggcaccgactccaacatcttt
atgaccctctacggcaccaacggcagcacagaggaagtgcagctggacaaaaagaaggcc
agatttgagcgagagcagaatgacaccttcatcatggagattctggacatcgccccgttc
accaagatgcggatccgaattgatggcctgggcagccggcccgagtggttcctggagagg
atcctgctgaagaacatgaacactggagacctgaccatgttctactacggagactggctg
tcccagcggaagggcaagaagaccctggtgtgtgagatgtgtgccgtcatcgacggggag
gagatgatggagtggacttcctataccgtctcagtgaagaccagtgacatcctgggagcg
ggcaccgatgccaatgtgttcatcatcatctttggggagaatggggacagcgggcccctg
gccctgaagcagtctgccaactggaacaagttcgagcggaacagcaccgacacgttcaac
ttttccgacatgctgagcctgggccacctctgcaagctgagggtctggcacgacaacaaa
gggatatttcctggctggcacctgagctatgtcgatgtgaaggacaattcccgcgatgag
accttccgtttccaatgtgactgctggctctccaagaatgagggcgacaggcagacagtc
cgtgactttccctgtgccaacaatgagatccacgatgagctggaggagacgacctatgag
atcatcatagaaaccggcaacggaggcgaaaccagggagaacgtctggctcatcctggag
ggcaggaagaaccgatccaaagagtttctcgtggaaaattcttctagacagcgggcgttt
aggaaggggaccacggacatatttgagtttgacagcgtctatctgggagacattgcctcc
ctctgcgtgggccacctcgccagggaggaccggttcatccccaagagagagctggtctgg
cacgtcaagaccatcaccatcaccgagatggagtacggcaacgtgtacttcttcaactgt
gactgcctcatccccctcaagaggaagaggaagtacttcaaggtttttgaggtcaccaag
actacggagagctttgccagcaaggtccagagcctggtgctggtcaagtacgaggtcatc
gtgacgacgggctatgagccaggggcgggcaccgatgccaacgtcttcgtgaccatcttt
ggggccaacggcgacacgggcaagcgggagctgaagcagaagatgcgcaacctgttcgag
aggggcagcaccgaccacttcttcctggagacgctggagctgggcgagctgcgcaaggtg
cggctggagcacgacagcagcggctacagctccggctggctggtggagaaggtggaggtc
accaacaccagcaccggcgtggccaccatcttcacctgcggcaggtggatggaccagaag
cggggcgatgggctcacctggagagacctcttcccttccgtatga
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integrated database retrieval system
