Phocoena sinus (vaquita): 116738947
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Entry
116738947 CDS
T07759
Symbol
CDH2
Name
(RefSeq) cadherin-2 isoform X1
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecules
psiu05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116738947 (CDH2)
09160 Human Diseases
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
116738947 (CDH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116738947 (CDH2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116738947 (CDH2)
04090 CD molecules [BR:
psiu04090
]
116738947 (CDH2)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
116738947 (CDH2)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Major cadherins
116738947 (CDH2)
CD molecules [BR:
psiu04090
]
Proteins
116738947 (CDH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_3
Cadherin_4
DUF4381
Stevor
Motif
Other DBs
NCBI-GeneID:
116738947
NCBI-ProteinID:
XP_032458771
Ensembl:
ENSPSNG00000007787
LinkDB
All DBs
Position
14:46070648..46285421
Genome browser
AA seq
906 aa
AA seq
DB search
MCRIVGAPRTLLPLLAALLQASVEASGETALCKTGFPEDVYSAVLSQDVLEGQPLLNVKF
SNCNGKRKVQYESSEPADFKVDADGMVYAVRSFPLSSEHSKFLIYAQDKETQEKWQVAVK
LSLKPTLPEDSVKESREIEEIVFPRQLTKHNGYLQRQKRDWVIPPINLPENSRGPFPQEL
VRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV
DINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGTVPEGSKPGTYVMTVTAIDADDPNAL
NGMLRYRILSQAPSSPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTY
GLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDIIVANLTVTDKDQPHTPAWNAVY
RISGGDPAGRFAIQTDPNSNDGLVTVVKPIDFETNRMYVLTVAAENQVPLAKGIQHPPQS
TATVSVTVIDVNENPYFAPNPKIIRQEEGLHSGTMLTTFTAQDPDRYMQQNIRYTKLSDP
ANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDIND
NAPQVLPQEAETCETPDPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTITRLNGD
FAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKVCQCDSNGDCTDVDRIVGAGL
GTGAIIAILLCIIILLILVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGE
EDQDYDLSQLQQPDTVEPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGL
KAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGDQDYDYLNDWGPRFKKLADM
YGGGDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtgccggatagtgggagcgccgcggaccctgctgccgctgctggcggccctgcttcag
gcgtctgtggaggcgtctggtgagaccgcattatgcaagactggatttcctgaagatgtt
tacagtgcagtcctgtcccaggatgtgctcgaaggacagcctcttctcaatgtgaagttt
agcaactgcaacgggaaaagaaaagtacagtatgaaagcagcgaaccagcagattttaag
gtggatgcagatggcatggtgtatgccgtgagaagctttcccctctcctctgagcactca
aagttcctgatatatgctcaagacaaagagactcaggaaaagtggcaagtggcagtaaaa
ttgagcctcaaaccaaccttacctgaggattcagtgaaggaatcacgagaaattgaagaa
atagtattcccaagacaattgactaagcacaatggctacctacaaaggcagaagagagac
tgggttatccctccaatcaacttgccagaaaattccagagggccttttcctcaagaactt
gtcaggatcaggtccgatagagataaaaacctctctctgcggtacagcgtaactgggccg
ggagccgaccagcctccaactggtatcttcattatcaaccccatctcaggtcagctgtca
gtgaccaagcctctggatcgcgagctcatagcccggtttcatttgagggcgcatgcagtg
gatattaatggaaaccaagtggagaacccgattgacattgtcatcaatgttattgacatg
aatgataacagacccgagttcttacaccaggtttggaatgggacggttcctgagggatca
aagcctggaacatatgtgatgacggtcactgcaatcgatgctgacgatccaaatgccctc
aatgggatgctgaggtacagaatcctgtcccaggcaccaagcagcccttcgcccaacatg
tttacaatcaacaacgagactggggacattatcacagtggcagctggactagacagagag
aaagtgcaacagtatacgttaataattcaagctacagacatggaaggcaatcccacatat
ggcctctcaaacacagccacggctgtcatcacggtgacagatgtcaatgacaatcctcca
gagtttactgccatgacattctatggcgaagtccctgaaaacagggtagatatcatagtt
gctaatctaactgtgacagacaaggatcagccccacacgccagcctggaacgccgtctac
agaatcagcggcggggaccccgccgggcgctttgccattcaaaccgaccccaacagtaac
gatggcttagtcaccgtagtaaaaccaatcgactttgaaacaaataggatgtatgtcctt
actgtcgctgcagaaaatcaagtgccattagccaagggtattcagcacccacctcagtca
actgcaactgtgtctgtcacagttattgatgtgaatgaaaacccttattttgccccaaat
cctaagatcattcgccaagaggaaggtcttcactccggtaccatgttaacaacgttcact
gctcaggacccagatcgatatatgcagcaaaatattagatacacaaaattatctgatcct
gccaactggctaaaaatagatcctgtgaatgggcagataactacaattgctgttttggac
agagaatctccaaatgtgaaaaataatatatataacgctactttccttgcttctgacaat
ggaatccctcctatgagtggaacaggaacgctgcagatctatttacttgatattaatgac
aatgcccctcaagtgctacctcaagaggcagagacttgcgaaactccggaccccaattca
attaacatcacggcacttgactatgacattgatccaaacgctggaccatttgcttttgat
cttcctttgtctccagtgactattaagagaaattggaccatcactcggcttaatggtgat
tttgctcagctcaacttaaagataaaatttcttgaagccgggatatatgaagttccaatc
ataatcacagattcgggtaatcctcccaagtcaaatatttccatccttcgcgtgaaggtt
tgccagtgtgactccaacggggactgcacagatgtggacagaattgtgggcgcagggctg
ggcacgggcgccatcattgcaatcctgctttgcatcatcatcctgctcatcctcgttctg
atgtttgtagtatggatgaaacgtcgggataaggaacgccaagccaagcaacttttaatt
gatccagaagacgatgtaagagataatattttaaaatacgatgaagaaggtggaggagaa
gaagaccaggactatgatttgagccagctccagcagcctgataccgtggagccagatgcc
atcaagccggtcggaatccgacggttggatgagagacccatccatgctgagccccagtac
ccggttcgatctgcagccccgcaccctggggacatcggtgactttattaatgagggcctt
aaagctgctgacaacgatcccacagctccgccatatgactccctcttagtgtttgactat
gaaggcagtggttccacggccgggtccttgagctccctgaactcctccagtagtggaggc
gaccaggattatgactacctgaacgactgggggccccgcttcaagaaactcgccgacatg
tacggtggaggcgatgactga
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