Phocoena sinus (vaquita): 116738963
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Entry
116738963 CDS
T07759
Symbol
EMILIN2
Name
(RefSeq) EMILIN-2
KO
K24246
emilin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116738963 (EMILIN2)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
116738963 (EMILIN2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
BLOC1_2
DUF1664
YwqH-like
NPV_P10
Bacillus_HBL
ATG17_like
INO80F
SHE3
Sec8_N
Motif
Other DBs
NCBI-GeneID:
116738963
NCBI-ProteinID:
XP_032458827
Ensembl:
ENSPSNG00000010385
UniProt:
A0A8C9E312
LinkDB
All DBs
Position
14:54483611..54534582
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AA seq
1070 aa
AA seq
DB search
MWQRTRPRPRAPCLWALALLALGGAGLCHADPQSRHPARPSARNKNWCAYIVNKNVSCSV
LEGSESFIQAQYNCAWNQMPCPSALVYRVNVRPRYVTRYKTVTQLEWRCCPGFRGGDCQE
GPRDPIKTPRPTPARPRNSVKKATDDEPSRVSEPGKTLSPTPAAELSRTVDPKQGPLELQ
EKKIQVLEEKVLRLTRTVLDLQSSFAGVNENLRHSVQDDASKMLASWLSNLHPQPVPDGA
VGGEPETVQLPGVLDNKESGMKDIKSELAEVKDALKTKSSKLEELDGKVKGYEGQLRQLQ
EAAQGPTVTMTTNELYQAYVDSQIDALREELMEGMDRKLADLKNSCEYKLIGLQQHCDDY
GSSYLGVMELIGEKETNLRKEISDLRARVQDPPARANCCDGAKNGDFGQQVKTLDQKIER
VAEATRMLNGRLDNEFDHLVVPEPDVDFDARWNELDARINVTEKNAEEHCFYIEETLRGT
ISGEVDDLKHLLDQKIQSLEERLGSALLAMANGSEAELAPPASAPPDGSGAGNEQVMVEL
NHLKDKVQVVEDMCLQNFQGEPRGGEDTLRNGDDPSAGDSLSLLKSLNDTMRRKFQETER
SIQRLQQNFSFLYSQLNHTEDHVSHLHNELSSGREGEKAAGRGSSKGAEPLPSPPAASVH
CCDQLEERWQRLQGQVLAELDACKEKTHGVQRGVSVVEDRVSRMEKTCSKLDSISGSLQK
IKEGLNKHVSSLWSCVRQMNGTLRAHSRDISGLKNSVQQFYSHVFQISTDLQDLIRFQPS
ATEGTSATPQPLPQGKAPHPAEAPTKPSAPALSPPPPSEDPGQQPYIGQQPVLPKRRPRP
LPPLLRPGWTGLPFLPGSTGVIMETGEAGPPGRMSMSGRGLPRGVDGQTGQGPIPRAEGY
AGAPGYPKSPPVASPGVPAPSLVSFSAGLTRKPFPSDAGVVLFNKVLVNDGDVYDPSTGV
FTAPYDGRYLITATLTPERDTYVEAVLSVANASVAQLHTAGYKREFLEYHRPQGAAHTCG
GPGAFHLIVHLKAGDGVNIVVTGGRLAHTDFDEMYSTFSGVFLYPSLSHL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagcggacacggccccggccccgcgcgccctgtctctgggcgctggcgctgctg
gccctgggcggcgcagggctgtgccacgccgaccctcagtccaggcaccccgcgcggccc
agcgccaggaacaagaactggtgcgcctacatcgtgaacaagaacgtgagctgctcggtg
ctggaaggaagtgagagttttattcaggctcagtacaactgtgcctggaaccagatgccc
tgtccgtccgcgctcgtttatcgtgtgaatgtcagacccagatacgtcaccaggtacaag
acggtgacacagttggaatggaggtgctgccctggcttccggggaggagactgccaagaa
ggtcccagagaccccataaagactccgcgccccacacccgctcggccgagaaacagcgtg
aagaaagccacagacgatgaaccaagccgagtctcagagcctgggaagactttgtcaccg
actcctgcagcagaactaagtcggaccgtagatccaaaacaggggcccctagaacttcag
gaaaagaaaatccaggtgcttgaggagaaggttctccgactcacaaggacggttcttgat
ctccagtcttcctttgctggagtgaatgaaaacctcagacactccgttcaggatgatgcc
agcaaaatgctggcatcgtggctcagtaacctgcacccccagccagtgcctgacggtgcc
gttggtggagaaccagaaacggtccagcttcctggtgtcctcgacaataaggaatctggc
atgaaggacatcaagtctgaattggctgaagtcaaggatgctctgaagaccaagagtagc
aagctggaagagctggatgggaaggtgaagggctatgaagggcagctcagacagctccag
gaggcggcccagggccctacggtcaccatgacgaccaatgagctctaccaagcgtatgtc
gatagtcagattgatgccctgagagaggagctcatggagggaatggacaggaagctggct
gatctgaagaactcgtgtgagtataagctcattggtctccagcagcactgtgatgactat
gggagcagctacctgggagtgatggagcttataggagagaaggaaaccaacctgagaaaa
gaaatcagtgaccttcgagcccgggtccaagaccctccagccagggcaaattgctgtgac
ggtgccaagaatggtgactttgggcaacaggtcaagacgttagaccagaaaattgaaaga
gttgctgaagcgactagaatgctgaacggacgactagacaatgagtttgaccacctcgta
gttccagagccagatgtggacttcgatgccagatggaacgaactggatgcaaggatcaac
gtgacagagaagaacgcagaggaacactgcttttacattgaagaaaccctccgggggacc
atcagtggggaggtagatgacttgaagcaccttcttgatcagaaaatacagtctctggag
gagcggctggggagcgctctcctggcgatggccaacggctcggaggcagaacttgctccc
ccagcgtcagccccgcctgatgggtcaggggctgggaacgaacaggtcatggtggagtta
aaccacctgaaggacaaagtgcaagtggtggaggatatgtgcctacagaacttccaggga
gagcctcgtgggggagaagatactttgcgaaatggagatgacccttcagcaggtgacagt
ttgagccttttgaaatctctaaatgacacaatgcgtaggaagtttcaagaaaccgagcgt
agcatccagagacttcaacagaattttagttttctttattctcaactaaaccacacagaa
gaccacgtgagtcatcttcataatgagctgagcagtggtagagaaggtgaaaaggctgca
gggcgtgggtcttctaagggggctgaacccctcccgtctcccccggccgcctccgtgcat
tgctgcgaccagctggaggagaggtggcagcggctgcagggccaggtcctcgccgagctg
gacgcttgtaaggagaagacacacggggtccagaggggggtctccgtggtggaggacagg
gtgtctcgtatggagaaaacctgcagcaaactggactccatctcaggaagtcttcagaaa
atcaaggaagggctcaacaagcatgtcagcagcctctggagttgtgtcaggcagatgaac
gggacgctccgggcacattccagagacatctctggcctgaagaattcagtccagcagttc
tatagccatgttttccagatttctacggacttgcaagacctgatcagatttcaaccatcg
gcaacggaggggacctcagcgacaccccagcctctgccccaagggaaggccccgcacccg
gcagaggcccccaccaagccatctgctccagcgctgagccctccaccgccgtccgaggac
cctggacagcagccgtacataggccagcagcctgtcctgcccaagagacgcccccggcca
ctgcccccgctgctgcggccaggctggacggggctgcccttcttgcctggctccaccggg
gtcattatggagactggagaggccgggcccccgggcaggatgagcatgtcggggcgagga
ctgccccggggcgtggacggccagactgggcaggggcccatccccagggccgaaggctac
gcgggagcaccagggtaccccaagtcaccgcctgtagcctccccaggggtccccgcaccg
tctctggtgtccttctctgcggggctcacccggaagcctttccccagcgatgcgggcgtc
gtcctctttaacaaagtgctggtgaacgacggggacgtgtacgaccccagcaccggggtc
ttcacagctccgtacgacgggcgctacctgatcacggccacgctcacccccgagagggac
acgtacgtggaagccgtcctttcggtcgccaacgccagcgtggcacagctgcacacggcc
ggctacaagagagaattcctggaataccaccggccccagggggctgcgcacacttgtggg
ggcccgggggcgttccaccttatcgtgcacttgaaggcaggggacggtgtcaacatcgtg
gtgaccgggggcaggttggctcacacagactttgacgaaatgtactccacgtttagtggg
gttttcttatatccttccctgtcccacctctga
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integrated database retrieval system