Phocoena sinus (vaquita): 116738970
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Entry
116738970 CDS
T07759
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116738970 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116738970 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116738970 (USP30)
04121 Ubiquitin system [BR:
psiu04121
]
116738970 (USP30)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116738970 (USP30)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116738970 (USP30)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
116738970 (USP30)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116738970 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
116738970
NCBI-ProteinID:
XP_032458837
Ensembl:
ENSPSNG00000017314
UniProt:
A0A8C9CE18
LinkDB
All DBs
Position
14:71801431..71832620
Genome browser
AA seq
517 aa
AA seq
DB search
MLSCRAEAAMTAADRAIQRFLRTGAAVRYKLMKNWGVIGGIAAALAAGIYVIWGPITERK
KRRKGLVPGLVNLGNTCFMNSLLQGLSACPTFIKWLEEFTTQYTRGQEESPQHQRLSLTL
LHLLKALSCQEVTDEEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDHQ
PRVTHLFDVHSLEQQSEMTPRQITCHTRGSPHPTSSHWKSQHPFHGRLTSNMVCKHCEHQ
SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK
VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFSEFLMMDIYKYHLLG
HKPVRRGPELHEEAGPALELQDGPAAPKPVRSHPGGPKTQIFMNGTCSPSFLPTLPTPMP
FPLPAVPDYSSSTYLFQLVAVVVHHGDMHSGHFVTYRRSPPSAKNPLSTSNQWLWISDDT
VRKASLQEVLSSSAYLLFYERVLSKMQHQSQECKSEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctgccgggctgaggcggcgatgaccgcggccgacagggccatccaacgattc
ctacggaccggggcggcagtcagatataaactcatgaagaactggggtgttataggtgga
attgccgctgcgctagcagcaggaatctatgttatttggggtcccattacagaaagaaag
aagcgtagaaaagggcttgtgcctggccttgtcaacctggggaacacctgcttcatgaac
tccctgctgcaaggcctgtctgcctgccccaccttcatcaagtggctggaagagttcacc
acacagtacaccaggggtcaggaggagtccccccaacaccagcgcttgtccttgacactg
ttgcatctcttgaaagctttatcctgccaagaagtcactgatgaagaggtcttggatgca
agctgcttgttggacgtcttaagaatgtacagatggcagatctcttcgtttgaagagcag
gacgctcatgagttattccatgtcattacctcgtctttggaggatgagcgggaccaccag
ccccgggtcacacatctgtttgacgtgcattccctagagcagcagtcagaaatgactccc
agacagatcacctgccacaccagagggtcacctcatcccacatccagccactggaagtcc
cagcatccttttcatggaagacttactagtaacatggtctgcaaacactgtgagcaccag
agtcccgttcgatttgataccttcgatagcctttcactaagtattccagctgccacatgg
ggtcatccactgaccctggaccactgccttcaccacttcatctcgtcggaatccgtgcgg
gatgtcgtatgtgacaactgtacgaagattgaagcgaaagggacgctgaatggggagaag
gtggaacaccagaggaccacgtttgtcaaacagttaaaactagggaagctcccccagtgt
ctgtgcatccacctccagcggctgagctggtccagccacggcacacccctgaagcgccac
gagcacgtgcagttcagcgagttcctgatgatggacatctacaagtatcacctgctcgga
cacaagcccgttcgccgcggccccgagctgcacgaggaggcggggcccgcgctggagctg
caggacgggccggcagcccccaagccagttcggagtcacccggggggccccaaaacacag
attttcatgaacggcacctgctccccatctttcttgcccacgctgccaaccccgatgccc
ttccccctcccagctgttcctgactacagctcctccacgtacctcttccagctggtggca
gttgttgtccaccacggagacatgcactcgggacacttcgtgacctaccgacggtccccg
ccttcggccaagaaccctctctccaccagcaaccagtggctgtggatttctgacgacacc
gtccgcaaggccagcctgcaggaggtgctgtcctccagcgcctacctgctgttttacgag
cgtgttctttccaagatgcagcatcagagtcaggagtgcaagtctgaagaatga
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