Phocoena sinus (vaquita): 116739064
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Entry
116739064 CDS
T07759
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116739064 (RPRD1A)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116739064 (RPRD1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
VSG_B
Motif
Other DBs
NCBI-GeneID:
116739064
NCBI-ProteinID:
XP_032459031
Ensembl:
ENSPSNG00000004790
UniProt:
A0A8C9BP56
LinkDB
All DBs
Position
14:39234939..39307623
Genome browser
AA seq
312 aa
AA seq
DB search
MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYEND
VLEQLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGD
AAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQL
TRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHM
HLPFAGDIYSED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccttctctgaggcggcgctggagaagaagctgtcggagttgagcaactcgcag
cagagcgtgcagaccctgtccctgtggctaatccaccaccgcaagcactcgcggcccatc
gtcacagtgtgggagcgggagctgcggaaagccaaaccaaacaggaagcttacttttctc
tacctagctaatgatgtcattcagaacagcaaaaggaaggggccagagtttacaaaagat
tttgcaccagttatagtggaggcttttaagcatgtttcaagtgaaactgatgaaagttgt
aagaagcaccttggaagagtgttatctatttgggaagaaaggtctgtttatgaaaatgat
gtattagaacaacttaagcaagctctgtatggcgataagaagcctaggaagcgaacatat
gaacagataaaggtggatgagaatgaaaactgttcctctctaggatctccaagtgaacca
ccacagactctagatctcgttagagcattacaagatctagaaaatgcagcttctggtgat
gcagcagttcatcaaaggatagcttctttgcctgttgaagttcaagaagtatccctacta
gataaaataacagataaagaatctggagaaagactttctaaaatggtagaggatgcttgt
atgttgctggcagattacaatggaagattggcagctgaaatagatgataggaagcaactc
actcgaatgttagcagattttcttcgttgtcaaaaggaagcccttgcagagaaagagcat
aaattggaagaatacaagcgcaagttagccagagtttccctggtgcgaaaagaactcagg
tcccggatccagagcctgccggacttatctcgattgcccaatgtcactggcagccacatg
cacctgccctttgcgggggacatctacagtgaagattga
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