Phocoena sinus (vaquita): 116739124 Help Entry 116739124         CDS       T07759                                  Symbol RTTN Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism psiu  Phocoena sinus (vaquita) Brite KEGG Orthology (KO) [BR:psiu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:psiu03037]     116739124 (RTTN) Cilium and associated proteins [BR:psiu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    116739124 (RTTN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N Motif Other DBs NCBI-GeneID:  116739124 NCBI-ProteinID:  XP_032459135 Ensembl:  ENSPSNG00000016449 LinkDB All DBs Position 14:7244066..7409892 Genome browser AA seq 2277 aa AA seqDB search MVLTGLIRKLGHQLAEIRARALKNILCKIEHSLICCADLVQERLLFLHLLEWFNFPSVPM KEEVLSLLNRLVKYPPAVQHLVDLGAVEFLSKLRSNVEPNLQAEIDGILDGLFILPSEVP ELHSASYQTSQTELPQQPEILTGYFPQDKGTFQQMEVPPRPVAANRTAKCLKFSTFPWLP LTTADRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKL AFGGDGKHRLALQSVSCLQQLCTYLRNRLNFHRDPSFFSSKQDTVSQNSSLSYCHEARVT HHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRVSIPSPLDMVH LDLPELEAEDTLELQFQQLSLPQLCVSILECAVPLLRTGSRQMIIRVLELLAEDMVLIGE AISADIWDDSSLFAIDMKKKLLMVLGSLGDSMCYHKSNISLEQPEAVLVHHRMAFVSISL FAVRLLQTLLPVEKASHFLPEPMSAALFLVSLDMPVSLEYPNIHEAVVAYLEQLNSENYS IYKRTAEAVYSLECTCNFLSDVGKEGEKNLLELVELADQALHSFSYHQHFPLIKEIICIC SKIWKSAQASPLLQGESQKVFLRMLSHPLPQVKVKTYHCCLEIVKECLGVHNVSKPVSSL CNGIHFLLHPKVLYEISAFGIQEPKNEVNATAKAILMHLLQGRLRMTALTWNKFIESLCP VIPVLQGYADTEDPLGNCILLLSKASSEAGEGMLPCTTWLKSILRLLLVKKPSVRVLALK LLASHLTREEGADTKRPSIDARVLSRVTDLFIVKKPIELKLDDRRELIIKLETVEKVYDI FISDDIDLILRKSAAEQLAVIMQDIKMHAVVKKLCLTDKIIEYLNKCVSQDGEVIECLVQ PSLTLLRKVLCADPVLRVSLSQQPSLLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVS RMDMWSDNLSNKPSSPSVFSLPVSVSRRYHLPVHVLGHHAVSPYSIVLPLSAECLALKPV SDMLRIAWNLSWYHGSDNLLKQMNSETKIQEFLDTLKLSTEDTLALKMTHTASGLKDCLR SIVQAAAHRGVRAALTRMSFYLLNDRLSFKGGTGPCGITLKSLSWHTTLNRFLQVLPACT EDEKLLIDIIHFLNKLLKEQRKNVSVELLNWLLELLLRHSPNPLLELLLLTESQAREEAD DIRTAVRQQLQKELVALFNTLLLGSVALTDRKCLELLYVFQTQLALKLLQCLRVTDAPRF YGLPSLERTLRGMAHLTAFPGWSSHSPFTKPLEICVKYLSGLLEVITSFYVERGGNAMSF MGKGVTKSTVLCLLHLSHEMMAQAQSSEWMSLWFLPLGSHSEEHATTQQGLAWLIPLWVD RDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAF IFQNLLVIPMPSEIIKGYTWQGLNLFWNKGPCVHDEDSGLSLIGKPALQALLYHCHFYEH LNQMVKHCYLGRYTFDLNCSALNGTSEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTL ETMVAASSASAEFQPLVPCTAPLPEASHDQFVAQGQHETASPRLPHDSSLSAPLPRQCVF VTPPLLSAMCSLLDSLLATTPGDTANAFRQARLIELLCSIADATLIETSVQELQALLPVS PPVEHTQAQRRPPGGEMGADASEVRKHAVGRGQSVWAGLCTASLQAAKVSFLLEYLSSLS RLLQSCLLVDPDLVIQDELLKPLITNIIRVLTICTKDISDIELISAFYQTWTHLFNLLAT LLRKAGPASFPSITMGLARYWATMVDMFCKCVGLSSTCPTLCTASLQFLSILLTEEAKRY LQDKDKTSLCHSPMMASLLDKTQESQKSLEQLNEVILQCYEVKSSRDVLKRVAVNALMSL LAVSRRAQKHALKAHLIDSCVEQMKHVHAQLNLESLRPGRAALKKKEDGFIKELSIAMQL LRNCLYQNEECKEAALEAHLVPVLHSLWPWLLMDDSLMQTALQLLCVYTANFPNGCSSLC WSSYGQYPVQTAHRGAPGSSLMLYILKMASQVPLENTAVQQMVFTFLSNLALSHDCKGVI QKSNFLQNFLSLTLPKGGNKHLSNLTILWLKLLLNISFGEDGQQMILRLDGCLDLLTEMS KFKHKSSPYLPLLIFHNICFSPANKPKILANEKVISVLASCLESENQNAQRIGAAALWAL IHNYQKAKTTLKNPSIKRRVDEAYSTAKKTFLNSEETPLNAYYLKCLENLVQQLNSS NT seq 6834 nt NT seq  +upstreamnt  +downstreamnt atggtcctgacggggctcatcaggaaactgggtcatcagctggccgagatcagggcacgc gctctcaagaatattctctgcaagattgagcacagtttaatctgctgtgctgatctggtt caggagaggctcctttttctccatttgctggaatggttcaatttcccgtccgttccaatg aaagaagaggttctgagtctgttgaacagattggttaagtatcccccagcagtccagcat ttggttgaccttggtgcagtcgaattcttatctaaacttcgttctaatgtggagccgaat ctacaggctgaaattgatggcattctggatggactttttattcttccttcagaagttcct gaactacattctgcatcttaccaaaccagtcaaactgaattgccacagcaacctgaaatc ttaacgggatattttcctcaagacaaaggtactttccagcagatggaagtgcctccaaga cctgtggcagcaaatcggaccgcgaagtgtttgaagttttctaccttcccttggctcccc ctgaccacagctgataggcatgttctctcctctaatgaaagctctttaagaagtagtaac cacactttaatctggaacacctgtgagctgttgaaagatgttatcatgcaagattttcct gctgagattttccttcaaaggccaaaaattgttcagagccttttatctctgttgaaactg gcctttggaggagatggaaaacatcgcctggcattgcagtcagtgtcctgcttgcagcag ctgtgcacgtatttaagaaacagacttaactttcaccgagatccaagtttcttctctagt aaacaagatacagtttcccaaaattcttctctgtcttattgtcatgaagcaagagtcact catcattcccagaatccttctccaggaagcagcagccctcggccttccgtagtgggacgc acaggccagcgacccagaggagacggccaggattgggacgccgtgtcttccagtggaagt agtagtcacgctcatgtcaactcaagggtctccatcccttcccctttggacatggtgcac ctggacctgccagagctggaggctgaggacacgctagagctgcagttccagcagctgagc ctgccccagctctgcgtctccatcctggagtgtgccgttcctctcttaagaacaggtagt agacagatgataataagagttctggaattgcttgcagaggatatggtacttattggtgaa gcgatttcagcagatatctgggatgacagcagtctttttgctatagatatgaaaaagaaa ctgctcatggtgttggggtcccttggagacagcatgtgctaccataaaagcaacatcagt ttggaacaaccagaggcggtgctggtgcaccacaggatggcctttgtcagcatttcgctg tttgcagtccgactgctgcagacgcttctccctgttgaaaaggcaagccactttttacca gagcctatgtcagcagcattatttctagtttctttggacatgcctgtttctttggaatat ccaaatattcatgaagctgttgtggcctatttggaacagctgaattctgaaaactacagt atttataaacgaactgcagaggctgtttattcacttgagtgtacctgtaacttcctgtct gatgttgggaaggagggagagaagaatctcttagaattagtggagctggcagaccaagcc ttacatagcttttcctatcatcagcatttccccctaataaaggaaatcatctgtatttgt tcaaagatctggaaatctgcacaggccagtccgttattacaaggagaaagtcagaaggtg tttctacgtatgttgtctcaccctttgccacaagtgaaagttaaaacttaccactgttgt ctggaaattgttaaggaatgtttaggtgtccataatgtcagtaaacctgtgtcttccctt tgtaatggaattcattttctacttcacccaaaagttctgtatgaaatctctgcgtttggt attcaagagcccaaaaatgaggtgaatgccactgccaaggccatcctgatgcatctgctg caggggcgactgaggatgacagcactgacctggaacaagtttatcgagtccctgtgtcct gtcatcccagtgctacagggctatgctgacacagaggatcctttgggtaactgcattctc ctcctaagcaaagcgagttccgaggctggtgaagggatgctcccctgtaccacctggtta aagtccatactgcggctcctgctggtgaaaaagccatcggtccgggtgctggcattaaag cttttagcaagtcaccttacaagggaagagggggcggataccaagcgcccttcaatcgat gccagagttctctccagagttactgatttatttattgtgaaaaagcctattgaactcaaa ttggatgacagaagagagctgattattaagttggagactgttgaaaaggtatatgacatc tttatctcagacgatattgatcttattttgagaaagtcagccgcagaacagttagctgtg attatgcaagatattaaaatgcatgctgtggtgaaaaaattatgcttaactgacaagata attgagtatttaaataaatgtgtgagtcaggatggagaggtaatagagtgtctagtacag ccaagcctcacgctcctgaggaaggttctctgtgctgacccagtcctgcgtgtttccctc tcccaacaaccttctctcttgaccctgctgttcagagtttccttgatatttcatgaagat tgtaccatcgtgactgaagttggagcattattttgtcttctgttatttgatgaagtatca agaatggatatgtggtctgataatctttccaataaaccttcttcaccatcagtcttcagt ttgcctgtttcagtttctagaaggtatcatctaccagtacatgtacttggccaccatgct gtgagtccttactccatagttttgccgttatctgctgagtgtttggccttgaagccggtc tcagatatgctgagaatagcttggaacctatcatggtatcatgggagtgataatctgttg aagcaaatgaactctgaaactaaaatccaagaatttctagatacattgaagttatccact gaggacacccttgctctgaagatgacgcacacagcgagcgggctgaaggactgcctccgc tccattgttcaggctgcagcccacaggggcgtgagggctgctctcacaaggatgagtttt tatcttctgaatgacaggttgtctttcaagggtggcactggcccatgtgggattaccttg aagtccttgtcttggcacaccacactaaacagatttttacaagtacttcctgcttgcacc gaagatgagaaactgctaatagatatcatacattttctaaataagttattgaaggaacaa agaaaaaatgtatccgtagaacttctaaactggcttctcgaattacttcttagacatagt ccaaacccactattggagctgctgcttctgacagagtcccaggcgcgagaggaagcagat gacatccgcaccgccgtccggcagcagctccagaaagaactggtcgctctcttcaacacc ctgctgctcggttccgtggcacttaccgacaggaaatgcttggaacttctttacgttttc caaacgcagctggctctgaaactgctccagtgtctgagagtcacggacgctcctcgcttc tacggcctgccgtcccttgagaggaccttacgagggatggcccaccttacagcatttccg ggatggagctcacactctcctttcacaaagccactagaaatttgtgtgaagtacttgtca ggtctcctcgaagtcattacttctttttatgtggagcgtggaggaaatgctatgtccttc atgggaaaaggtgtcacaaagagcacggttctctgcttgcttcacttatcccatgagatg atggcccaggcccagagctcggagtggatgtcactttggttcttgcctttgggtagtcac agtgaagaacatgctaccactcaacaggggttggcttggttgattccattgtgggttgac cgagacccagaggtgaggttcacttcactgggattaggatcggcactgactacccttgaa actggctgtgtggccttagcaaacagttgtcaaaacatttctggtgggctctggggaacc gtggtgaacattcttctggaccagtcggagtgtagcatggtacgccgggaggctgcattt atttttcaaaatctccttgtaattccgatgccttcagaaatcataaagggttatacttgg cagggcttaaatcttttctggaacaagggcccctgtgtccatgatgaggactctggcctg tcgctcataggaaaacctgcccttcaggctcttttgtaccactgccatttttatgaacat ttgaatcagatggtaaaacattgttacctgggacggtatacgtttgatttgaattgttct gctcttaatggaacttctgaaggcaatgacttaaatggtttagatgactcattcaagttt tggagggctccatctcggatgtccagtcaagatcgagatccaagttctctctccactttg gaaacaatggtggcagcttcgtcggcaagtgctgaatttcagccgctagtgccctgcacg gcgcctctccctgaagcctcacatgaccagtttgtggctcaaggtcagcatgaaactgca tctccacggcttcctcatgattcatccctttctgctcctctgcccagacagtgtgttttt gtcactccgcctcttctttccgcgatgtgcagcctcctagacagcctcttggcaacgact ccaggcgacactgcaaatgcttttcgacaagctcgtctcatagagcttctttgtagcatc gcagatgccaccctcatagagacaagcgttcaggagctccaggccctgctgcccgtgtca cctcctgttgaacacactcaggctcagagaaggcctcctggaggtgagatgggagcagat gcctcggaggtgaggaaacacgccgtgggtcgtgggcagagtgtgtgggcaggactctgc acggcgagcctgcaggcagccaaggtatcctttctcctagagtacctgtcctctttgtcc aggcttcttcagtcatgtttattggtagatcctgaccttgtgattcaggatgagcttctg aaacctcttatcacaaacatcatcagagttctcaccatatgcaccaaagatatatcagat atagagttaatatcggctttttatcagacatggacacatttatttaaccttctggccaca ctcctgaggaaagctggccctgcctctttcccatctattacgatgggtctggccaggtac tgggcgacgatggtcgatatgttctgcaaatgtgtgggtttgtctagcacctgccccact ctgtgtactgccagcctgcaattcctttctattctcctgactgaagaagcaaaaaggtat ctccaggataaggataaaacaagtttatgccacagtccaatgatggcttcacttcttgat aaaacccaggaaagtcagaaatctctagaacaacttaatgaagtaattcttcagtgttat gaagtaaaatcctccagagatgtcctgaaaagagtcgctgtgaatgcactgatgtcgctt ctggccgtcagtagaagagcacagaaacacgctctgaaggcccatctaatagacagttgc gtggagcagatgaagcacgttcatgcacagctgaacctggaatctctgaggcctgggagg gcagcactgaagaaaaaggaggatggttttattaaagagttaagcattgccatgcagctc ctaagaaattgtctttatcaaaatgaagaatgtaaagaggcagccctggaagctcatctt gtccctgtcttgcactctctctggccttggcttttgatggatgattcactgatgcaaact gccctgcagctgctttgtgtctatactgcaaattttccaaatggttgcagttctctctgt tggtcaagttacggacagtatcctgttcaaactgcacatcgaggggcccctggcagctcc ctgatgctgtatatcctgaagatggcttcccaggttcctctcgagaatactgcagtccag cagatggttttcacgtttctttcaaacctggccttgtctcatgactgtaaaggggtaatt caaaaaagtaacttcttacagaacttcctgtctctaacattgccaaaaggaggaaataaa catctcagtaatctgaccattctttggttgaagttactcctgaacatatcgtttggagaa gatgggcagcaaatgatcctgaggctcgatggctgtttagacttacttacagagatgagc aaattcaagcataagagcagcccttatttacctcttcttatttttcataacatttgcttc agccctgccaataagcccaagatcctggctaatgaaaaagtcattagtgtgctagcttcc tgtctggaaagtgagaatcaaaatgctcagaggattggagcagctgcgctttgggctttg attcacaattaccaaaaggcaaaaacaactttgaaaaatccatcaataaaaagaagagtg gatgaagcatattccacagcaaagaaaactttcttaaactcagaagaaactcctctaaat gcctattatttgaaatgtcttgaaaaccttgtgcagcaacttaactcttcatga

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