Phocoena sinus (vaquita): 116739166
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Entry
116739166 CDS
T07759
Symbol
AFG3L2
Name
(RefSeq) AFG3-like protein 2 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
116739166 (AFG3L2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116739166 (AFG3L2)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psiu03110
]
116739166 (AFG3L2)
Peptidases and inhibitors [BR:
psiu01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
116739166 (AFG3L2)
Chaperones and folding catalysts [BR:
psiu03110
]
Other chaperones and cochaperones
AAA proteases
116739166 (AFG3L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
RuvB_N
AAA_5
AAA_16
TIP49
nSTAND3
AAA_14
gpW
AAA_2
AAA_17
AAA_28
Mg_chelatase
IstB_IS21
ThcOx
AAA_33
Motif
Other DBs
NCBI-GeneID:
116739166
NCBI-ProteinID:
XP_032459232
Ensembl:
ENSPSNG00000020988
LinkDB
All DBs
Position
14:complement(61153252..61180912)
Genome browser
AA seq
805 aa
AA seq
DB search
MAHRCLLLWGRGACRPRGLPPMLVPGGRAGPTERLCLRTLYRYATTEAKTSRSSLLTDVI
AAYQRFCSRPPKGFEKYFPNGKNGKKTSEPKEVMGEKKEPKPAAAPRPSGGGVGGGGKRG
GKKDDSHWWSRFQKGDIPWDDKEFRMYFLWTALFWGGVLFYFLFKSSGREITWKDFVNNY
LSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGEN
RVPVVYIAESDGSFLLSMLPTVLIITFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVL
KDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAK
ATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG
NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPD
IKGRASIFKVHLRPLKLDSTLEKEKLARRLASLTPGFSGADVANVCNEAALIAARHLSDS
INQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPR
GKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYA
QIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEK
KADVEKVALLLLEKEVLDKNNMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDW
NREREVSEEPSGEKAASQVQGAGPA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccggtgcctgctgctgtggggccggggcgcctgccggccccgcgggctgccc
ccgatgctcgtgcctggcggccgcgcgggccccaccgaacggctctgcctgcggacgctt
tatcgatatgctacaactgaagcaaaaaccagcagaagttctcttctgacagatgtgatt
gctgcttatcagagattctgttctcggcctccaaaaggatttgaaaaatactttcccaat
gggaaaaatggaaaaaaaactagtgaacctaaagaagttatgggagaaaaaaaagaaccg
aagccagcggctgccccgcgtccttctggaggaggagttggtggtggtggaaaacgaggt
gggaagaaagacgattctcattggtggtccaggttccagaagggtgacattccatgggat
gacaaggaattcaggatgtactttctttggaccgccctgttttggggaggagtcctgttt
tacttcctgttcaagagctccgggagagaaatcacatggaaggactttgtcaataactac
ctctccaaaggagtagtagacagactggaagtcgtcaacaagcgttttgttcgagtgact
tttacaccaggaaaaactcctgttgatgggcagtatgtctggttcaatattggcagtgtg
gacacctttgagcggaatctggaaactttacagcaggaattgggcatagaaggggagaat
cgggtccctgtggtctacattgctgagagtgatggctccttcctgctgagcatgctgccc
accgtgctcatcatcaccttcctgctctacaccatccggagggggccggccggcatcggc
cgcacgggccggggcatgggcggactcttcagtgtcggagaaaccactgccaaggtccta
aaggacgagatagatgtgaagttcaaagatgtggcgggctgcgaggaggccaagctagag
ataatggaatttgtgaatttcctgaaaaacccaaagcagtatcaagacctaggagcaaaa
atcccaaagggtgccattctcaccggtcctccaggcactgggaagacactgctggcgaag
gccacagccggagaagccaacgtccctttcatcaccgttagtggatctgagttcttggag
atgtttgtcggtgtgggtccagctagagtccgtgacttatttgcccttgctcggaagaat
gccccttgcatcctcttcattgatgaaatagatgccgtgggaaggaagagaggaaggggc
aacttcggggggcagagtgagcaggagaataccctcaaccagctgctggtggaaatggat
ggctttaacacaacgaccaacgtggtcattttggcgggcaccaaccgaccagatatcctg
gaccctgcgctgatgaggccggggcgcttcgacaggcagatctttatcggacccccggac
ataaaaggaagagcctctattttcaaagttcacctccgaccactgaaactggacagcacc
ctggaaaaggagaagctggcaagaagactcgcatccttgaccccggggttttcaggagcc
gatgttgccaacgtctgcaatgaagctgctttgatcgctgcaagacacctttcagattcc
ataaatcagaaacacttcgaacaagcaattgaacgagtaattggcggcttagagaaaaaa
actcaggttctgcagcccgaggagaagaagacagtggcataccacgaggctggccacgca
gttgccggctggtatctggagcacgcggaccccctcctgaaggtgtccatcatccctcgg
ggcaaagggctgggctacgcgcagtacttacccaaggagcagtacctctataccaaagag
cagctcctggacaggatgtgcatgactctgggtggccgcgtgtcagaggagatcttcttc
gggagaatcacaaccggcgctcaggacgacttgcgaaaagtgactcagagtgcgtatgcc
cagattgttcagttcggcatgaatgaaaaggtcgggcaaatctcctttgacctcccccgt
cagggggacatggtgttggaaaagccttacagcgaagccacggccagactaatagatgac
gaagtacgaatacttatcaacgatgcttacaagaggacagtcgctcttctcacagaaaag
aaagcagatgtggagaaggttgctctcctcctgttagagaaagaagtgttagacaagaac
aacatggtggaactcctgggccccagaccgtttgcagaaaagtctacatatgaggaattt
gtggaaggcaccggcagcctggatgaggacacctcgctgcctgagggcctgaaggactgg
aacagggaacgggaggtctcagaggagccctcgggcgagaaggccgccagccaggtccag
ggtgctggccctgcatag
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