Phocoena sinus (vaquita): 116739187
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Entry
116739187 CDS
T07759
Symbol
OSBPL1A
Name
(RefSeq) LOW QUALITY PROTEIN: oxysterol-binding protein-related protein 1
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116739187 (OSBPL1A)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116739187 (OSBPL1A)
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
116739187 (OSBPL1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PH
DUF1028
Motif
Other DBs
NCBI-GeneID:
116739187
NCBI-ProteinID:
XP_032459268
Ensembl:
ENSPSNG00000008616
LinkDB
All DBs
Position
14:49407705..49619996
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AA seq
950 aa
AA seq
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MSTEAEQQLLHHARNGNAEEVRQLLETMERNEVTADINCKGRSKSNLGWTPLHLACYFGH
RQVVQDLLKAGAEVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNAHTTVVNGNGQTAKEV
THDKEIRNMLEAVERTQQXKLEELLLAAAREGRTAELTALLNRPNPPAVNCSDQLGNTPL
HCAAYRAHKHCALKLLKSGADPNLKNKNDQKPLDLAQGAEMKHVLVGNKIIYKALKRYEG
PLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKPTDSCLFF
IKCFDDTVHGFRVPKNSLQQTREDWLEAIEEHSAYSTHYCSQDQLTDDEEEDAVSGVDLK
ESLEKAQICQQRLDREISNFLRMIKECDVAKEMLPSFLQKVEVVSEASRETCVALSDCLN
LFTKQEGVRNFKLEQEQEKNKILSEALATLATEHHELEQSLVKGSPPLSILSEDEFYDAL
SDSESERSLSRLEAVTAHCFEEEGEHLRSRKHRMSEGKDCGGGDALSNGIKKHRTSLPSP
MFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFADPV
ERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHA
EGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKL
WIEQYGNVEITNHKTADKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLY
SVDPATFDAYKKNDKKNTEEKKNSKQMSASEESDEMPMPDSESVFVIPGSVLLWRIAPRP
PNSTQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQ
RAARKNRSKLEEDWKTRWFHQGPNPYSGAQDWLYSGSYWDRNYFNLPDIY
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaagcagagcaacagcttctccatcatgccagaaacggcaacgctgaagaa
gtaagacagttattggaaaccatggaaaggaatgaagtaactgctgacattaactgcaaa
ggaagaagtaagtctaatttgggctggacaccgcttcatctggcctgctattttggacat
agacaagtggtccaggatctgttaaaggctggtgcagaagtaaatgtattaaatgacatg
ggagacacgccacttcatcgggctgcctttacaggacgaaaggagttggtaatgcttctt
ttagaatataatgctcatactactgttgttaatgggaatggacagacagcaaaggaagtc
actcatgacaaagaaatcagaaacatgcttgaagctgtagaaaggactcaacaanagaag
cttgaagaattacttttagcagcagcaagagaaggcagaacagcggaactcacagctctg
ctcaacaggccgaatcctcctgctgttaactgttcggatcagttaggaaatacacccttg
cattgtgccgcctatcgggctcataaacattgtgccttaaagcttctaaaaagtggagcg
gaccctaatctgaagaacaaaaatgatcagaaacctcttgatcttgcccagggtgctgaa
atgaaacacgttcttgttggtaataagatcatctacaaagcattgaaacgatacgaaggc
cctctctggaagagttcaagattttttggctggagattattctgggtagtgttagaacat
ggagtcctttcatggtataggaaacagcccgatgcagtccataatatttatcgccaggga
tgcaaacatctaactcaagcagtatgcacggtaaaacccactgatagctgcctcttcttt
attaaatgcttcgatgacactgttcatggcttcagggttcctaagaatagccttcagcag
acaagagaggactggctggaagcaatagaagagcattctgcttacagcactcactactgt
tcccaggaccagttgactgatgatgaagaggaagatgcagtttctggtgtagacttgaag
gaatccttagagaaagcacagatatgccagcagagactagacagggaaatttccaacttt
ctcagaatgattaaggagtgtgacgtggctaaagaaatgcttccatcattccttcagaaa
gttgaagttgtctctgaagcttctagagaaacttgtgtagctttgagtgattgccttaat
ctcttcaccaaacaagaaggggtgaggaattttaaattggaacaggaacaagaaaaaaac
aaaattttgtcagaagcgctggcgactctagccactgaacatcatgaattagagcagtct
ctggttaaaggctccccacctctcagcatccttagtgaggacgagttctatgatgcactg
tcagattccgagtccgaacggtccctgagtagattggaagcagtgactgcgcactgcttt
gaagaggaaggagagcacctgaggagtagaaagcacagaatgtccgaaggaaaagactgt
ggtggtggagatgctctctccaatggcatcaaaaaacacagaacaagcttgccctcccct
atgttttccagaaatgacttcagcatctggagcatcctgagaaaatgtattggaatggaa
ctctccaagatcacaatgccagttatatttaacgagcctttgagcttcctccagcgactc
actgaatatatggagcatacgtacctcatccacaaggccagttcatttgctgatcctgtg
gaaaggatgcagtgtgtagctgcatttgctgtatctgctgttgcttctcagtgggaacgc
actggaaagcctttcaacccacttctgggagagacttatgaattagttcgagatgacctt
ggtttcagactcatctctgagcaggtcagccatcacccacccattagtgcatttcatgct
gaaggattaaacaatgatttcatctttcatggctcaatctatcccaaactgaagttctgg
gggaagagcgtagaagcagaacccaaaggaaccatcacgttggagctccttgaacacaat
gaagcatatacgtggacaaatcctacctgctgtgtacataacatcattgtggggaaactc
tggattgagcagtacggcaacgtggagatcacaaaccacaagactgcggacaaatgtgtg
ttgaattttaagccatgcggcctttttggtaaggagttacacaaagttgaaggctacatt
caagataaaagcaaaaagaagctctgtgccctctatgggaagtggacagaatgtttatac
agtgttgaccctgccacatttgatgcttacaaaaaaaatgataagaaaaatactgaagag
aagaagaacagcaaacagatgagcgcttctgaggagtcagatgaaatgccaatgccagat
tccgagagtgtgtttgtcatccctgggagcgttctcctgtggcgaatagccccgcggcct
cccaattcgacccagatgtataattttactagctttgcaatggttttgaatgaagtagac
aaggaaatggagagtgtgattcctaagacagactgcaggctacgtcctgacatcagagcc
atggaaaatggggaaatagatcaagctagtgaagaaaaaaagcgacttgaggagaaacaa
agagcggcccgcaagaacaggtccaagttggaggaggactggaagacgaggtggttccat
caaggtcctaatccctacagcggagcccaggactggctttactccggcagctactgggac
agaaactacttcaatttgcctgacatttattaa
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