Phocoena sinus (vaquita): 116739199
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Entry
116739199 CDS
T07759
Symbol
PIWIL1
Name
(RefSeq) LOW QUALITY PROTEIN: piwi-like protein 1
KO
K02156
aubergine
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116739199 (PIWIL1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116739199 (PIWIL1)
piRNA pathway
116739199 (PIWIL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
GAGE
ArgoL1
ArgoN
ArgoL2
Neurobeachin
Motif
Other DBs
NCBI-GeneID:
116739199
NCBI-ProteinID:
XP_032459291
Ensembl:
ENSPSNG00000010087
LinkDB
All DBs
Position
14:87671139..87697540
Genome browser
AA seq
861 aa
AA seq
DB search
MTGRARARARGRARGQEAVQCVGAAASQQPGYIQPRLQPPPDEGELGARGRQRGTVGATA
KPQELQISAGFHELSLADRGGRRRDFHDLGVNTRQNLDHVKITFTGSSGTIVRLSTNHFR
LTSRPQWALYQYHVDYNPLMEARRLRSALLFQHEDLIGRCHAFDGTILFLPKRLQHKVTE
VFSQTRNGEHVRITVTLTNELPPTSPTCLQFYNIIFRRLLKMMNLQQIGRNYYNPSDPID
IPNHRLVIWPGFTTSILQYENNIMLCTDVSHKVLRSETVLDFMFNLFHQTEEHKFQEQVS
KELIGLIVLTKYNNKTYRIDDIDWDQNPKSTFRKADGSEVSFLEYYRKQYNQEITDLKQP
VLVSQPKRRRGPGGTSPGPAMLIPELCYLTGLTDKMRNDFNVMKDLAVHTRLTPEQRQRE
VGRLIDYIHKDDNVQRELRDWGLSFDSNLLTFSGRILQAEKIHQGGRTFDYSPQFADWSK
ETRGAPLISVKPLDNWLLIYTRRNYEAANALIQNLFKVTPAMGIQMKKAVMIEVDDRTEA
YLRVLQQKVTSDTQIVVCLLSSSRKDKYDAIKKYLCTDCPTPSQCVVARTLGRQQTVMAI
ATKIALQMNCKMGGELWSVDMPLKLAMIVGIDCYHDTTAGRRSIAGFVASINEGMTRWFS
RCVFQDRGQELVDGLKVCLQAALRAWNSCNEYMPSRIIVYRDGVGDGQLKTLVNYEVPQF
LDCLRSVGRGYNPRLTVIVVKKRVNARFFAQSGGRLQNPLPGTVIDVEVTRPEWYDFFIV
SQAVRSGSVAPTHYNVIYDSSGLKPDHIQRLTYKLCHIYYNWPGIIRVPAPCQYAHKLAF
LVGQSVHREPSLSLSNHLYYL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgactgggagagccagagcgagagcaagaggaagggctcgcggtcaggaggcggtgcag
tgcgtgggcgccgctgccagtcagcagcctggttacattcagcctagactgcagccgcca
ccagacgagggggagttaggtgcccgcggacgacagagaggaacagtaggagcgacagcc
aagccacaagagctccagatatctgctggatttcacgagttatcattagcagacagagga
ggtcgtcgtagagactttcatgatcttggtgtgaatacaagacagaacctagatcatgta
aagattacttttacaggttcttcaggtactatagtaaggctgagcactaaccattttcga
ttgacatcccgtccccaatgggccttatatcagtatcacgttgactataacccgttgatg
gaagccagaagactccgctcagctcttctttttcaacatgaagatttaattggaaggtgt
catgcttttgatggaacgatattatttttacctaaaagactacagcacaaggttaccgaa
gtttttagtcagacccgaaatggagagcatgtgaggataactgtcaccttgacaaatgag
ctcccgcccacatcaccaacttgtttgcagttctataatattattttcaggaggctttta
aagatgatgaatttgcagcagattggacggaattattataacccaagtgacccgattgat
attccaaatcataggttggtgatttggcctggcttcactacttctattcttcagtatgaa
aataacatcatgctttgcactgatgtcagtcataaagtccttcgaagtgaaactgtttta
gatttcatgttcaacttgtttcatcaaactgaagaacataaatttcaagaacaagtttct
aaagagctgataggtttaattgttctcaccaagtataacaataaaacatacagaatagac
gatattgactgggaccagaatccaaagagcaccttcaggaaagccgacggctctgaagtc
agcttcttagagtactacaggaagcaatataaccaagaaatcaccgacttgaagcaacca
gttttggtcagtcagccgaagagaaggagaggccccggaggcacgtcaccaggccctgcg
atgcttatccctgagctctgctacctcacaggtctaactgataaaatgcgcaatgatttt
aatgtgatgaaagacttggctgttcacacgagactaactccagaacaaaggcagcgtgaa
gtgggaagactgattgattacattcataaagatgataacgtgcagagggagcttcgagac
tggggtctgagcttcgactccaacttactgaccttctcaggaagaattctgcaagcagaa
aagatccatcaaggtggaagaacatttgattacagtccacagtttgcagattggtcaaag
gaaacaagaggtgcaccattaattagtgttaagccactagataactggctattgatctat
actcgaagaaattatgaagcagccaatgcgttgatacaaaatctatttaaagttacacca
gccatgggcatacaaatgaaaaaagcagtaatgattgaagtggatgatagaactgaagcc
tatttaagagtcttacagcagaaggtcacatcagatacccagatagttgtttgtctgctg
tcaagcagtcggaaggacaaatacgatgctattaaaaaatacttatgtacagattgccct
actccaagtcagtgcgtggtggcccggaccttaggcaggcaacagactgtcatggccatc
gctacgaagatcgccctgcagatgaactgcaagatgggaggagagctttggagcgtcgat
atgcctctaaagctagccatgatagttggcattgattgttaccatgacaccacagctgga
cggaggtcaattgcaggctttgtagcaagcatcaatgaagggatgacccgctggttctct
cgctgtgtatttcaagatagagggcaagagctagtagatgggctcaaagtctgcttgcaa
gctgctctgagggcttggaatagctgcaatgaatacatgcctagtcgaattatcgtgtat
cgggatggcgtaggagacggtcagcttaaaacattggtgaactatgaagtaccacagttt
ctggattgcctaagatctgttggtagaggttacaacccaagactaacggtcattgtggtg
aagaaacgagtgaacgccagattttttgctcagtctggaggaagacttcaaaatccactt
cctggaacagttattgatgtagaggttaccagaccagaatggtatgacttctttatcgtg
agccaggcagtgagaagcggcagtgttgctcccacacattacaacgtcatctatgacagc
agtggcctgaagccagaccacatacagaggttaacttacaagctatgtcatatctattat
aactggccaggcatcatccgtgttcctgccccttgccagtatgcccacaaactggctttc
ctcgttggccagagcgttcacagagagcccagcctgtcactgtcaaatcacctttactac
ctctaa
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