Phocoena sinus (vaquita): 116739209
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Entry
116739209 CDS
T07759
Symbol
SART3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116739209 (SART3)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116739209 (SART3)
Spliceosome [BR:
psiu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116739209 (SART3)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
116739209 (SART3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
LSM_int_assoc
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
RRM_occluded
Lsm_interact
FAT
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
116739209
NCBI-ProteinID:
XP_032459307
Ensembl:
ENSPSNG00000015593
LinkDB
All DBs
Position
14:complement(71391209..71457024)
Genome browser
AA seq
989 aa
AA seq
DB search
MATAAAASASEAEAEPKAGPKAEGEEAEAKEARTRRKVLSRAVAAATYKTVGPEWDQQEE
GVSESDGDEEYAMASSAESSPGEYEWEYDEEEKNQLEIERLEEQLSINVYDYNCHVDLIR
LLRLEGELTKVRMARQKMSEIFPLTEELWLEWLHDEISMALDGLDREHVYDLFEKAVKDY
ICPSIWLEYGQYSVGGIGQKGGLEKVRSVFERALSSVGLHMTKGLAIWEAYREFESAIVE
AARPIAGFLSPFDREQTFDSQLEKVHSLFRRQLAIPLYDMEATFAEYEEWSEDPIPESVI
QNYNKALQQLEKYKPYEETLLQAEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCL
VPDLWIRYSQYLDRQLKVKDLVLSVHSRAVRNCPWTVALWSRYLLAMERHGVDHRVISVT
FEKALSAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSKELEELRSAFARALEYLKQEVEE
RFSESGDPSCLIMQNWARIEARLCSNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHG
DTQHCRKALHRAVQCTSDYPEHVCEVLLTMERTEGGDLSALPLAWGTLEDWDIAVQKTET
RLARVNEQRIKAAEKEAALAQQEEEKVEQRKRARAEKKALKKKKKTRGSDKSKADEDDEK
EWGDDEEEQPSKRRRVENSVPPAGEAELGPEADPGLSGSSAPAAAEPPSEQKEQRAAARR
RDVPRVLHDSSKDGVTVFVSNLPYGLREPAATLRPLFEACGDVVEVRPIFSNRGDFRGYC
YVEFKEEAVALRALELDRQTVEGRPMFVSPCVDKSKNPDFKVFRYSTALEKHKLFVSGLP
FSCTKEELEEICKVHGTVKDIRLVTNRAGKPKGLAYVEYENESQASQAVLKMDGMTIKEN
VIKVAISNPPQRKAPEKPEARKAPGVAMVPRQIYGARGKGRTQLSLLPRALQRPSATAAQ
AENGPAPPPAATEVPKMSNADFAKLLLRK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggccgcagcatcggcttcggaagcggaggctgagcccaaggccgggccc
aaggccgagggggaggaggctgaagctaaggaggctaggacgaggaggaaggtgttatcg
cgggccgtggccgccgcgacgtacaagaccgtagggccggagtgggaccagcaggaggaa
ggcgtaagtgagagcgatggagatgaggagtacgccatggcttcctcggccgagagctcc
ccgggggagtacgagtgggagtacgacgaagaggagaagaaccagctggagatcgagcgg
ctggaggagcagctgtctatcaacgtctatgattacaactgccacgtggacctgatccgg
ctgcttcggttggaaggggagcttaccaaagtgaggatggcccgccagaagatgagcgag
atctttcctttgaccgaagagctctggctggagtggctgcatgacgagatcagcatggcc
ctggacggcctggacagagaacatgtgtacgacctcttcgagaaagcggtgaaggattac
atctgtcctagcatttggctagagtacggccagtactcagtcggcgggattggtcagaaa
ggtggccttgagaaagtccgctctgtgtttgaaagggccctctcgtccgtcgggttacac
atgaccaagggactcgccatctgggaggcttatcgggagtttgaaagtgccatcgtggaa
gctgcccggcccatagctggcttcctttccccttttgaccgggaacaaacctttgattca
cagctggagaaagtccacagtctcttccggcgacagttggcgatcccactctacgatatg
gaggcaacgttcgcagagtatgaagaatggtcagaagaccctataccagagtcagtaatt
cagaactataacaaagcactacagcagttggagaaatataaaccctatgaagaaacactg
ttgcaagcagaagcacccaggctggctgaatatcaagcatacatcgattttgagatgaaa
attggagaccccgcccgcattcagttgatctttgagcgcgctctggtcgagaactgcctt
gtcccagacttatggattcgttacagtcagtacctagatcggcagctgaaagtaaaggat
ttggttttatctgtacacagtcgcgctgttagaaactgcccgtggacagttgccctgtgg
agtcggtacctcttggccatggaaagacatggagttgatcatcgagtgatttcggtgacc
ttcgagaaagctctgagtgccggcttcattcaggccactgattatgtggagatttggcag
gcgtaccttgattacctgaggagaagggtcgattttaaacaagactccagtaaagagctg
gaggagctgcggtctgcattcgcccgcgccttggagtacctgaagcaggaggtggaggag
cgtttcagtgagagtggagatccaagctgcctgatcatgcagaactgggctcggattgag
gctcgactgtgcagtaacatgcagaaagcccgggagctctgggacagcatcatgaccaaa
gggaacgccaagtatgccaacatgtggcttgagtattacaacctggaaagggcccacggt
gacactcagcactgcaggaaggctctgcaccgggccgtccagtgcaccagtgactaccca
gaacacgtctgtgaggtgttgctcaccatggagaggacagaaggtggggacctcagcgcg
ctgcctctggcttggggtactttagaagattgggatatagccgttcagaaaaccgaaact
cgactggctcgcgttaatgagcagagaattaaggctgcggagaaggaagcagccctcgcc
cagcaagaggaagaaaaggttgaacaacggaagagggcccgggccgagaagaaagcgttg
aaaaagaagaagaagaccagaggctcggacaagagcaaagctgatgaggatgatgaaaaa
gagtggggcgacgatgaggaagagcagccttccaagcgcaggagggtggagaacagcgtt
cctcccgctggggaagctgagctgggcccagaagccgacccgggcctctctgggagcagc
gcccctgcggccgcagagcctccctctgagcagaaggagcagcgggcggccgcccgaagg
agggatgtgcccagggtgctgcacgacagcagcaaggacggcgtcaccgtcttcgtcagc
aacctgccctatggcctgcgggagcctgccgccacgctccggccgctcttcgaggcctgc
ggggatgtggtcgaggtccgccccatcttcagcaaccgcggcgacttccggggctactgc
tacgtcgagtttaaagaggaggcggtggccctgcgggccctggagctggatcggcagacc
gttgaggggcggccaatgtttgtctccccctgtgtggacaagagcaaaaacccagacttc
aaggtgttcaggtacagcactgccctggagaagcacaagctgttcgtctcgggcctgcca
ttctcttgcacgaaagaggaactagaagagatctgcaaggtccacggcactgtgaaggac
atccggctggtcaccaaccgggccggcaaacccaagggcctggcctatgtggagtacgaa
aacgaatcccaggcatctcaggctgtcctgaagatggacggcatgactatcaaagagaac
gtcatcaaagtggctatcagcaacccgcctcagaggaaggctccggagaagccagaggca
agaaaagccccgggggtcgccatggtgccgcggcagatctacggagcgcgggggaagggg
aggacccagctctctctgctgccccgcgccctgcaacgcccaagcgccaccgcagcccag
gctgaaaacggccctgccccaccgccggcggccaccgaggtacccaagatgtccaatgcc
gactttgccaagttgcttctgagaaagtga
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