Phocoena sinus (vaquita): 116739242
Help
Entry
116739242 CDS
T07759
Symbol
CXXC1
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116739242 (CXXC1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116739242 (CXXC1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116739242 (CXXC1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
116739242 (CXXC1)
COMPASS/SET1 complex (yeast)
116739242 (CXXC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
116739242
NCBI-ProteinID:
XP_032459368
Ensembl:
ENSPSNG00000008435
LinkDB
All DBs
Position
14:23490308..23495716
Genome browser
AA seq
656 aa
AA seq
DB search
MEADASDPEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEK
MAKAIREWYCRECREKDPKLEIRYRHKKSRERDSTERDGSEPRDEGGGRKRPAPDLDLQR
RAGSGAGVGTMLARGSASPHKSSPQPLVATPSQHHQQQQQQIKRSARMCGECEACRRTED
CGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVMPSESLPRPRRPLP
TQQQPQPSQKLGRLREDEGAVAAAAVKELPEAMATPEPLSDEDLPLDPDLYQDFCAGAFD
DHGLPWMSDAEESPFLDPALRKRAVKVKHVKRREKKSEKKKEERYKRHRQKQKHKDKWKH
PERTDAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPC
IAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEESNEGDSDDT
DLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKT
YCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGEFCRLPKRQCNRHYCWEKLRRAE
VDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggatgcttcagacccagagcctccagatgccggggaggacagcaagtcagag
aacggggaaaacgcgcccatctactgcatctgccgcaaaccagacatcaactgcttcatg
atcggctgtgacaactgcaatgagtggtttcatggggactgcatccggatcactgagaag
atggccaaggccatccgggagtggtactgccgggagtgccgagagaaggaccccaagctg
gagatccgctatcggcacaagaagtcacgggagcgggacagcactgagcgagacggcagt
gagccccgggatgagggtggagggcgcaagagacctgccccggatttggacctgcagcgc
cgggcggggtcaggggcaggggttgggaccatgcttgctcggggctctgcttcgccccac
aaatcctctccacagcccctggtggccacacccagccagcatcaccagcagcagcagcag
cagatcaaacggtcagcccgtatgtgtggggagtgtgaggcctgccggcgcaccgaggac
tgtggccactgtgacttctgccgagacatgaagaagtttgggggccccaacaagatccgg
cagaagtgccggctgcgtcagtgccagcttcgggcccgggaatcgtacaagtacttccct
tcctcgctctcgccggtgatgccctcagagtccctgccaaggcctcgccggccactgccc
acccagcagcagccacagccatcgcagaagctggggcgcctccgcgaggacgagggggca
gtggcagcagcagcggtcaaggagctgcctgaggctatggctacacccgagccactctcg
gacgaggacctccccctggaccctgacctgtaccaggacttctgtgcgggggcctttgat
gaccatggcctgccctggatgagtgacgcggaggagtccccgttcctggaccctgcgctg
cggaagagggcggtgaaagtgaagcatgtgaagcgtcgggagaagaagtctgagaagaag
aaggaagaaagatacaagcggcatcggcagaagcagaagcacaaggacaaatggaaacac
ccggagcgcactgacgccaaggaccctgcgtcgctgccgcagtgcctgggccctggctgt
gtgcgcgctgcccagcccggctccaagtattgctcagacgactgcggcatgaagctggca
gccaaccgcatctacgagatcctcccccagcgcatccagcagtggcagcagagcccctgc
attgctgaggagcatggcaagaagctgctcgaacgcatccgccgggagcagcagagcgcc
cgcacccgccttcaggaaatggagcgccgattccacgagctcgaggccattatcctgcgg
gccaaacagcaggctgtgcgcgaggacgaggagagcaatgagggtgacagcgatgacacg
gacctgcagatcttctgtgtctcctgcgggcaccccatcaacccacgtgttgccttgcgc
cacatggagcgctgttatgccaagtacgaaagccagacgtcctttgggtccatgtacccg
acccgcatcgagggggccacacgactcttctgcgatgtctacaatcctcagagcaagaca
tactgtaagcggctccaggtgctgtgccccgagcactcacgggaccccaaagtgccagct
gacgaggtatgcgggtgcccccttgtacgtgacgtctttgagctcacgggtgagttctgc
cgcctgcccaagcgccagtgcaaccgccactactgctgggagaagctgcggcgtgccgag
gtggacctggagcgcgtgcgcgtgtggtacaagctagacgagctgtttgagcaagagcgc
aacgtccgcaccgccatgaccaaccgggcgggcttactggccctgatgctgcaccaaacc
atccagcacgacccgctcacgaccgacctgcgctccagcgccgaccgctga
DBGET
integrated database retrieval system
