Phocoena sinus (vaquita): 116739313
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Entry
116739313 CDS
T07759
Symbol
CCBE1
Name
(RefSeq) collagen and calcium-binding EGF domain-containing protein 1 isoform X1
KO
K19638
collagen and calcium-binding EGF domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116739313 (CCBE1)
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Gene cluster
GFIT
Motif
Pfam:
cEGF
Collagen
EGF_CA
FXa_inhibition
EGF_3
EGF
hEGF
Plasmod_Pvs28
EGF_Tme5
Motif
Other DBs
NCBI-GeneID:
116739313
NCBI-ProteinID:
XP_032459513
Ensembl:
ENSPSNG00000020391
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Position
14:15184687..15435414
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AA seq
429 aa
AA seq
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MVPPPPSRGGAARGQLGKSLGPLLLLLALGHTWSYREEPEDGDREICSENKIVTTTYPCL
KPSGELTTCFRRKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYD
RERHRRREKPYCLDIDECATSNETLCAHICINTLGSYRCECREGYIQEDDGRTCTKGDKY
PNDTGHDEKVENAVRAGTCCATCKEFHQMKQTVLQLKQKIALLPNSAADLGKYITGDKVL
ASNAYIPGPPGLPGGQGPPGSPGPKGSPGFPGIPGPPGQPGPRGSMGPMGPSPDLSHIKQ
GRRGPVGPPGAPGRDGSKGERGAPGPRGSPVSSTTCPASPVQCAQGCSSDEPGPPGSFDF
LLLMLADIRNDITELQEKVFGHRTDSSAEEFPLPQEFSSSPETMDFGSGDDNPKRTETRD
LGTHRDFYP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgccgcctccgagccggggaggagcggcgagggggcagctgggcaagagcctg
ggtccgcttctgctgctcctggccctgggacacacgtggagctaccgagaggagcccgag
gacggcgacagagaaatttgctcggaaaacaaaatcgtcacgaccacatacccgtgtctg
aagccttcaggcgagctcacgacgtgcttcaggcggaagtgctgcaaagggtataaattt
gtccttggacaatgcatcccagaagattatgatgtatgtgctgaggctccctgtgaacag
cagtgcacagataacttcggccgagtgctgtgtacttgttacccaggataccgatatgac
cgggagaggcatcggaggcgggagaagccgtactgtctggatatcgacgagtgtgccacc
agcaacgagacgctgtgtgcgcacatctgcatcaacaccttgggcagctaccgctgtgag
tgccgggagggctacatccaggaggatgatgggaggacgtgcaccaagggagacaaatac
cccaatgacactgggcacgatgagaaggtggagaacgcggtgagagccggcacctgctgc
gccacgtgcaaggagtttcaccagatgaagcagacggtgttgcagctgaagcagaagatt
gccctgctacccaacagcgctgcggacctgggcaagtacatcactggtgacaaggtgctg
gcctccaatgcctacattccaggacctcctggcctgcctgggggccagggcccccccggc
tcaccaggaccaaaggggagcccaggcttcccgggtattccaggcccccccgggcagccc
ggcccgcggggctcaatgggacccatgggaccgtctcctgatctgtcccacattaagcaa
ggccggaggggccccgtgggcccaccaggtgccccaggaagagatggttctaagggggaa
agaggagcacctggccccagagggtctccagtaagtagcaccacctgtcctgcttcccca
gtgcagtgtgctcagggctgcagctctgatgagcctggaccccctggttctttcgacttc
ctgttgctcatgctggcggacatccgcaacgacatcaccgagctgcaggaaaaggtgttc
gggcaccggactgactcttcagcagaggagttcccgttacctcaggaattttccagctct
ccagagaccatggacttcggctctggagatgacaaccccaaaagaaccgagacaagagac
ttgggaacccacagagacttctatccttag
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