Phocoena sinus (vaquita): 116739351
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Entry
116739351 CDS
T07759
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116739351 (TTC28)
Cilium and associated proteins [BR:
psiu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
116739351 (TTC28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_SusR
TPR_14
Rapsyn_N
RPN7
DUF6340
TPR_17
TPR_BSK1_C
TPR_16
TPR_NPHP3
TPR_19
TPR_9
ANAPC5
TPR_6
TPR_11
TPR_YpiA_C
Motif
Other DBs
NCBI-GeneID:
116739351
NCBI-ProteinID:
XP_032459597
Ensembl:
ENSPSNG00000011134
UniProt:
A0A8C9C1T4
LinkDB
All DBs
Position
14:67885307..68494843
Genome browser
AA seq
2482 aa
AA seq
DB search
MEQSPPPVLEPTPGSTPARSRRRREPESPPAPPPIPLFGAKTIGRRSPDGPVLSKAEFVE
KVRQSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARL
LNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLE
PTYQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSAL
SSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQ
LVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNM
GAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYV
LELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNL
GIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQE
LQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNL
GNFHCSRGEYVQAAPYYEQYLRLAPELQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQD
LALAKDLHDKLSQAKAYCNLGLAFKALLNFNKAEECQKYLLSLAQSLNNSQAKFRALGNL
GDIFICKKDISGAIKFYEQQLGLAHHVKDRRLEASAYAALGTAYRMIQKHDKALGYHTQE
LEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNM
GITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAVKYY
EQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAY
GELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYDTALQYH
QLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSY
SSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQL
YRASALFETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAF
ADLLVERQTGQQDSDPYSPVTIDQILEMVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKF
HEHYLGDNTVENSSDFQAGSSTALPTATSSALEQHITSVREALGVESYYSRACASSETES
EAGDIMDQQFEEMNNRLNSVTDPTGFLRMVRRNNLFNRSCQSMTSLVSNATSPIKDGTSS
LPRRQSSFARPPLRALYDLLVAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGS
SSNEYLYERFALIAVPSIRSLGPQAKSHLRKNPPAYSSSTSMAAVVGNPKLPSAVMDRWL
WGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTP
SVEGTPAGSKSSFGHPYTIPESLRVQDDTSDGESISDCPPLQELLLTAADVLDLRLPVKL
VVLGSSQESNSKVTADGVIALTRAFLAAGAQCVLVSLWPVPVAASKMFLHALYSSLLNGL
KASAALGEAMKVVQSSKAFSHPSNWAGFLLIGSDVKLNSPSSLIGQALTEILQHPERARD
ALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLP
AAVFFPTSDPGDRLQQCSSTIQSLLGLPNPALQALCKLITASETGEQLISRAVKNMVGML
HQVLVQLQAGEKEQDFASAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGK
QANRRTMHFALQALLALFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQHPPFSPT
GAESIASDAISVYSLSSIASSMSFVSKPEGGSEGGGPPGRQDYDRSKNKNAFPQRSTLPR
SQLSPQTRPADSKDEEEYEGFSIISTEPLAAYQENRQTRFSPDHKQSRVGTAGGVKVSVS
SKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESNPKLD
PQELAQKILEETQSHLIAVERLQRGSGQGKGTNPEDGISVPNSAAVFRASETSAFSRPAL
SHQKSQLSPVTIKPKPPARSSSLPKVSSGYSSPTASEASIKDSPSQHSGRPSPGSDSQTS
LTDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSPADA
PDIDKLKMAAIDEKVQAVHNLKMFWQSTPQHSTGPMKIFRGTPGTMTSKRDVLSLLNLSP
RHSKKEEGADKLELKELSLQQCGETPPKAPPNGHWHTETTSLSTLPLPAGPPAAVPTRPL
RLPSGNGYKFLSPGRFFPSSKC
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcgccgccgccggtgctcgagcccaccccggggtcgaccccggcacggagc
cgtaggcggcgggagcccgagtcaccgccggcgccgcctccgattcctctctttggtgct
aagactattggccggagaagtcctgatggaccagtgctgagcaaagctgaatttgttgag
aaagttcgtcagagtaatcaggcctgtcatgatggagatttccacacagctattgttctg
tacaatgaagccctagctgttgaccctcagaattgcatcttatacagcaatagatctgca
gcatatatgaaaatccagcagtatgacaaggcactggacgatgcaatcaaagcccgactt
ctcaatcccaaatggccaaaggcatacttccgacagggtgttgccctccagtaccttgga
cgtcatgccgatgccctggcagcctttgcatctgggctggctcaggaccccaagagtctc
cagcttctggtgggaatggtagaagcagccatgaaatctcccatgagagactccctcgag
cccacttatcaacagcttcagaaaatgaaactggacaagagtccctttgtggtcgtgtct
gtggttgggcaagaactcctgacagctggccatcatggggcctctgtggttgtcttagaa
gccgctctgaagattggcacctgcagcctcaaactgagaggttccgttttctctgcgctg
agcagtgcttactggtctctcggaaacacagagaagagcactggatacatgcagcaggac
ttggatgtagccaagaccttaggtgaccagacaggagaatgccgagctcatgggaatctg
ggctctgcattcttctccaaaggaaattaccgggaggctctcactaaccacaggcatcag
ttggtgcttgccatgaaactcaaggatcgagaggcagcttcatcagccctgagcagtctg
ggccacgtgtacacagccattggagactaccccaatgcactggccagtcacaaacagtgt
gttcttctcgccaagcaatccaaagatgagctttctgaagcccgagagctcggcaacatg
ggagctgtgtatattgccatgggtgattttgagaatgctgtgcagtgccatgagcagcat
ctgaagatagccaaggacctgggcaacaagcgagaagaggcccgcgcctacagcaatctg
ggcagtgcctaccactacaggagaaacttcgacaaggccatgtcttaccacaactacgtg
ctggagctggctcaggagttgatggagaaggccattgagatgcgggcctatgctggcctg
ggccatgctgccaggtgcatgcaggatttggagagagctaaacagtaccatgagcagcag
ctgggcatcgctgaggatctcaaggaccgggctgcagaggggcgagcgtcctccaatctg
ggaatcatacaccagatgaaaggtgattatgataccgcactgaaactccacaagacccac
ctgtgcatcgcccaggagctgagtgattacgccgcccagggccgtgcctacgggaatatg
ggcaatgcctacaatgctctgggcatgtacgaccaggctgttaagtaccaccggcaggag
ctgcagatctccatggaagtgaatgaccgtgcctcacaggcatccacacacgggaacctt
gccgtggcctaccaggccctgggtgcccacgaccgggccctgcagcactatcagaaccac
ctgaacatcgctcgggagctgcgtgacatccagagcgaggcccgggccctcagcaacctg
ggcaacttccactgctctcgaggggagtacgtccaggccgccccctattacgaacagtac
ctccggcttgctcccgagcttcaagacatggaaggagaagggaaggtctgccacaatctt
ggctacgcccattactgccttggaaattaccaggaggcggtgaagtactatgagcaggat
ctggccctggccaaagaccttcatgacaaattgagccaagcaaaagcctactgcaacttg
ggcttagcattcaaggctctgctgaattttaacaaagccgaagagtgtcagaagtactta
ctgtccctagcccagtccctgaataattcccaggctaaatttcgagccctggggaacctg
ggcgatatattcatctgtaaaaaagatatcagtggtgcaataaaattctatgagcagcag
ctgggcttggctcaccatgtaaaggacagaagactggaggccagtgcatatgcagccctg
ggcactgcataccgaatgatccagaaacacgacaaggccttgggttatcacacgcaggaa
ctggaggtatatcaggagctgagcgacttgccgggagagtgcagagctcatgggcacctg
gcagccgtctacatggcccttgggaaatacacgatggcattcaagtgttatgaagagcag
ctggatctagggcagaagctgaaagatccgagtctagaagctcaggtctatggcaacatg
ggcatcacaaagatgaacatgaatgtgatggaagaagccatcggctacttcgagcagcag
ctggccatgctgcagcagctgagtggaaatgagtctgtgctcgacaggggccgggcctat
ggcaacctgggggattgctatgaggccctgggtgactatgaggaagctgtaaagtactat
gaacaatatttatctgttgcccagagtctaaatcgcatgcaagaccaagccaaggcttac
cggggcctgggaaatggacacagggcaatggggagcttgcagcaagcccttgtgtgcttt
gaaaagaggctcgtggttgcccatgagctcggggaggcctttaataaagcccaggcctat
ggagagctgggaagtctgcacagccaattagggaattacgaacaagccatttcctgcctt
gaacgccagctgaacattgctagagagatgaaagaccgagctctggaaagtgatgctgcc
tgtggcctggggggcgtttaccagcagatgggggaatacgatacagccctgcagtaccac
cagctggatctgcagatagcagaggaaaccaacaaccccacgtgccagggacgggcctat
gggaacctgggcctgacctacgagtccctgggcacctttgagagggccgtggtctatcaa
gaacagcacttgagcatcgctgcacagatgaacgacttggtggccaagacggtgtcttat
agtagccttggaaggacccatcatgctttacagaactattcccaggcagtcatgtacttg
caggaaggtttaaggttagcagagcagctgggccgaagagaagatgaagccaaaattcgc
catggtcttggcctctccctttgggcgagtgggaacctggaggaagcccaacatcagctc
tatagagcatcagccttgtttgaaacgatccgacacgaggtgcagctgagcacggactac
aagctctccctctttgacctgcagacatcctcctaccaggccttgcagcgagtgctcgtc
agcctcggccatcatgatgaagccctggccgtggcagaaagaggacggacaagggcgttt
gcagatctcctggtagaacggcagacaggacagcaggactccgacccctactccccagtc
actattgatcagatcttagagatggttaatggccagaggggactagtgctttactattcc
ctggctgcgggctacctgtacagctggctgcttgctcctggggcagggattctgaagttt
cacgaacactacctgggagacaacacggtggaaaactccagtgacttccaggctggcagc
agcacagcccttccaacagccaccagctcggccctagagcagcacatcaccagcgtccgg
gaggccctgggtgtggaatcttactactcaagggcctgtgccagcagtgagacagagagt
gaagccggagacatcatggaccagcagtttgaggagatgaacaacaggctcaactcggtc
accgaccccactggctttcttcggatggttcgccgcaacaacctctttaacaggagctgc
cagagcatgaccagcctggtcagcaacgccacgtcgcccatcaaggacgggacctcctct
cttcccaggaggcagagctcgtttgccaggccgccgctccgcgctctgtacgacctgctc
gtggcacccatggaagggggcttgatgcactccagcggccctgtgggccggcaccggcaa
ctggtcctggttcttgagggggagctctacctcatcccgttcgccctcctgaaaggaagc
tcctccaatgagtacctgtacgagcgcttcgccctcatcgccgtcccttccatccgctcc
ctcggtcctcaggccaagtctcacctgcggaagaaccctcccgcctactccagctccacg
tccatggcggctgtggtcggcaaccccaagctcccatcggcggtgatggacaggtggctg
tggggcccgatgccgtcagccgaggaggaggcctacatggtgtccgagctgctgggctgc
cagccgctggtgggcagcgtggccaccaaagagcgggtcatgagcgccctgacccaggcc
gagtgcgtccactttgccacccacatctcttggaaactgtcggccttggtcctcacgccc
agtgtggaaggcacccccgctggcagcaagagctccttcggccacccctacaccatccct
gagtccctgcgggtgcaggatgacaccagcgatggcgagagcatctcggactgcccaccg
ctgcaggagctgctgctcacagccgctgacgtcctggacctgcggctgcccgtgaagctg
gtggttctcggctcctcccaggagtccaacagcaaggtcacagccgacggggtcatcgcg
ctgacgcgggccttcctggcggccggcgcacagtgtgtcctcgtatctctgtggcctgtg
cccgtggctgcttccaagatgttcctgcacgccttgtactcatccctgctgaatggcctg
aaggccagcgcggccctgggcgaggccatgaaggtggtgcagagcagcaaggccttctca
cacccctccaactgggcagggttcttgctcatcgggagcgatgtgaagctcaacagtccc
tcctcgctcatcggccaggccctcaccgagatcctccagcacccagagcgggcgcgggat
gccctgcgagtgctgctgcacctggtggagaagtccctgcagcgcattcagaacgggcag
cgcaacgccatgtacacatcccagcagagcgtggagaacaaagtgggcggcatccctggc
tggcaggccctcctcaccgccgtgggcttccggctggaccccccggccagtggcctgcca
gcagccgtcttcttcccaacctccgacccgggcgaccggctccagcagtgcagcagcacc
atccagtccctgctgggtctgcccaaccctgccctccaagccctctgcaagctcatcact
gcctcagagacgggcgagcagctcatcagccgggctgttaaaaatatggttggaatgctc
caccaggtgctggtccagctgcaggccggcgagaaggagcaggacttcgcatcagccccc
attcaggtctccatcagcgtccagctgtggcggctcccgggatgtcacgaattcctggcg
gctctaggttttgatctctgtgaggttggtcaggaggaagtaatcctgaaaaccgggaaa
caagccaatcgacggaccatgcactttgcgctccaagccctgctcgcactcttcgattcc
actgagctgcccaagcgcctcagccttgacagctcatcctccctggagtctctggcctca
gcccagtctgtctccaatgctctgcccttgggctaccagcaccctcctttctctcccacc
ggtgcagagagcatagcctcagatgccatctctgtgtacagtctgagctccatcgcctcc
tcaatgagctttgtctccaagcctgagggtgggtcagagggcggaggtcctccaggaagg
caggactacgaccggtccaagaacaagaatgccttcccacagcgatccaccctgcctcgg
agccagctgtccccccagacccgccctgcagacagcaaagacgaagaagaatacgaaggg
ttttccatcatcagcactgagcctttggcggcctaccaagaaaacagacagactcgcttc
tcaccagatcacaaacagtcccgcgtcgggacagctggcggcgtgaaagtttcggtaagc
tccaaggggagcataagcactccaaactctccagttaaaatgactctgattcccagccca
aactcacccttccagaaggttggaaaactagcaagttcagatacaggagaatcagaccag
tctagcacagaaacagatagtaccgtgaaatcccaagaagaaagcaacccaaagcttgat
ccacaagagttggcccagaagattctagaggagacacaaagccatctcattgcggtggaa
cgtcttcagaggggtagtggtcaaggtaagggcactaatcctgaagatggcatttccgtg
cccaacagcgctgctgtcttcagagcgtcagaaacaagtgcgttcagcaggcctgccctc
tcccaccagaagagccagctgtcgccagttactatcaaaccaaagcccccagccagaagc
tcttcactacccaaggtgagttcaggatacagcagccccaccgcctcagaggcgtccatc
aaagacagcccgagccagcacagtggccggccgtcgcccggctctgactcccagacctcc
ctgaccgaccagcctctctttaagctgaagtatcccagctctccttacagtgctcacatt
tccaaatcaccaaggaacatgtccccgagctcaggccaccagtctcctgctggaagtgca
ccgtccccagctctctcctattcctcagctggctccgctcgctcgagtccagctgacgct
cctgacatagacaagctgaagatggcagccatcgacgagaaggtgcaggctgtacacaac
ctgaagatgttttggcagagcacaccccagcattccacgggaccaatgaaaatattccgg
gggacccctggaacgatgacttccaagagagatgtcctcagtctattaaacttgtcacct
cggcacagcaagaaggaggaaggagcagacaagctggaacttaaggagctgtctttgcag
caatgtggggaaacgcccccaaaagcccctcccaacggacactggcatacggagaccacc
tcgctgagcacgctgccgttgcccgccggccctcctgccgcagtgcccacgcgccctttg
agacttccttctggaaacggctacaagtttctgtccccaggaagattttttccttcctct
aaatgctaa
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integrated database retrieval system
