Phocoena sinus (vaquita): 116739456
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Entry
116739456 CDS
T07759
Symbol
TARS2
Name
(RefSeq) threonine--tRNA ligase, mitochondrial isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116739456 (TARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psiu01007
]
116739456 (TARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116739456 (TARS2)
Enzymes [BR:
psiu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
116739456 (TARS2)
Amino acid related enzymes [BR:
psiu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116739456 (TARS2)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116739456 (TARS2)
Prokaryotic type
116739456 (TARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
116739456
NCBI-ProteinID:
XP_032459634
Ensembl:
ENSPSNG00000001970
UniProt:
A0A8C9B9J4
LinkDB
All DBs
Position
1:109961266..109979002
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AA seq
718 aa
AA seq
DB search
MGLCQTWRRLRIPGLQACGLHMAAVPTPPHWLVERLGLFEELWTAQVKRLASLAQEEHRT
IKISLPGGQKVDAVAWNTTPYQLAQQISSKLADTAVAAQVNGEPYDLERPLETDSDLRFL
TFDSAEGKAVFWHSSTHVLGAAAEQLLGAVLCQGPSTGCGFYHDFFLGKERTIKGSELPA
LERICQELAAAAQPFRRLEASQDQLRQLFKDNPFKLHLIEEKVTGPTATVYGCGMLVDLC
RGPHLRHTGQIGGLKLLSNSSSLWRFSGTPETLQRVSGISFPTAEELRAWEEWREEAELR
DHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNVLVAFIRAEYTRRGFSEVKTPTLFSTK
LWELSGHWEHYREDMFALQPPGSDSHAGSQSDHSTSHPTGTLALKPMNCPAHCLMFAHRP
RSWRELPLRLADFGALHRAEASGSLGGLTRLRRFQQDDAHIFCAPDQLEAEIRGCLDFLR
SVYTVLGFSFSLALSTRPSGFLGEPCLWDQAEQVLQQALEEFGEPWDLNPGDGAFYGPKI
DVHLRDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGALERPVLIHRAVLGSVERMLGVLA
ESCGGKWPLWLSPFQVVVIPVGTEQEEYAREAQRSLQAAGLVGDLDADSGLTLGRRIRRA
QLAHYNFQFVVGQKEQSKRTVNVRTRDNRRLGERDLVEAIQRLLELQNTRVPNAEEIF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtgtcagacgtggcggcggcttcggatcccagggttacaagcctgcgggctg
cacatggcagctgtgccgacccctccacactggttggtagagcggcttggcctttttgag
gagctatggactgctcaggtaaagaggttagcaagcctggcacaggaggaacaccggact
atcaagatatcacttcctggaggccagaaagtggatgctgtggcatggaacacaacccct
taccaactagcccagcagatcagttctaaactggccgatactgcagtggctgctcaagtg
aatggagaaccttatgatctggagcggcccttagagacagattctgacctcagatttctg
acattcgattctgcagaggggaaagcagtattctggcactccagtacccatgtcctgggg
gcagcagctgaacaacttctaggtgctgtcctctgtcaaggtccaagcacaggatgtggc
ttttaccatgatttcttccttggaaaggaacggacaatcaaaggctcagagctgcctgct
ttggaacggatttgtcaggaacttgcagctgctgctcaacccttccggagactagaggct
tcccaggatcagcttcggcagctcttcaaggataacccctttaagcttcacctgatcgag
gagaaagtgacaggtccaacggcaacagtatatgggtgtggtatgttggttgatctgtgc
agaggcccccaccttcgtcatactggacagattggaggcctgaagctgctatcgaactca
tcatccttatggaggttttctggcaccccagagacactgcagagagtgtcagggatttcc
ttccccactgcagaggagctgagggcctgggaagagtggagggaggaagcagagttacgg
gaccaccggcgcattgggaaggaacaggagctcttcttcttccatgaactgagccccggg
agctgcttcttcctgcctcgagggacaagggtgtataatgtactcgtggcttttatcagg
gccgagtacacccgccgtggtttctcagaagtgaaaacccccacgttgttttctacgaaa
ctctgggaactgtcagggcactgggagcattaccgggaagacatgtttgccctgcagccc
ccaggctctgacagccatgccggctcccagagtgaccactctaccagccatcccacaggc
acgcttgccctcaagcccatgaactgccctgcgcactgcctgatgttcgcccaccggccc
agatcctggcgagagctgcccctgcgactggccgacttcggggccttgcaccgggccgag
gcctctggcagtctggggggactgacccggctgcggcgcttccagcaagatgacgctcac
atcttctgtgcacccgatcagctggaagcagagatccgaggctgtcttgatttcctccgc
tctgtctacactgtccttgggttctccttcagcttggcactgtctacccggccatctggc
ttcctgggagagccttgcctttgggaccaggctgagcaggtccttcaacaggccctagaa
gaatttggagaaccctgggacctcaaccctggagatggtgccttctatgggcctaagatt
gacgtgcacctccgcgatgccctgggtcggccccatcagtgtgggacaatccagcttgac
ttccagctgcccctgagatttgacctccagtacaaggggcaggcgggggccctggagcgt
ccagtcctcattcatcgagcagtgctaggttctgtggaaaggatgttgggagtgctggcg
gaaagctgcgggggaaaatggccactatggctgtcaccattccaggtggtggtcatacct
gtgggaactgagcaagaggaatatgccagggaggcacagcggagcctgcaagctgcagga
ctggttggcgacctggatgctgactccggactgaccctcggccggaggatccgccgggct
cagcttgcccactacaattttcagttcgtggttggccagaaagagcagagtaagagaaca
gtgaacgttcggactcgagataatcgtcgacttggggaacgagacttggtcgaggctata
cagcggctactggagctacagaacaccagggtcccaaatgctgaagaaattttctga
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