Phocoena sinus (vaquita): 116739490
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Entry
116739490 CDS
T07759
Symbol
RHBDL1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116739490 (RHBDL1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
116739490 (RHBDL1)
Peptidases and inhibitors [BR:
psiu01002
]
Serine peptidases
Family S54: Rhomboid family
116739490 (RHBDL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF5580
EF-hand_7
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
116739490
NCBI-ProteinID:
XP_032459677
Ensembl:
ENSPSNG00000008990
LinkDB
All DBs
Position
15:50098290..50101331
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AA seq
435 aa
AA seq
DB search
MGKAEMRWGDGWRASGARGRGPRYRFLQLAPGTMWAQGPGPRVLGACLSRLTWLSPVVLG
PGPPSDLGRWPPRPQQLDPENTGFIGADTFAGLVHRHELPLDPAKLDMLVALAQSNERGQ
VCYQELVDLISSKRSSSFKRAIANGQRALPQDGLLDEPGLGVYKRFVRYVAYEILPREVD
RHWYFYRHRSCPPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRA
RAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITD
MRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSP
PLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGWWVVLLAYGTFLLFAIFWN
IFAYDLLGAHIPPPP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggcagaaatgaggtggggagacggctggagagctagcggagctagaggccgg
ggacctaggtaccggttcctacagctagctcctgggaccatgtgggcacaggggcctgga
cccagggtgctcggagcctgcctctcccgcctgacgtggctcagccctgtggtcctgggg
cccggcccaccctcagaccttggccgctggcccccccgaccccagcagctggaccctgag
aacaccggcttcatcggtgcggacaccttcgctggcctggtgcaccgccatgagctgccc
ctggacccggccaaactggacatgctggtggccctggcccagagcaacgagcggggccag
gtctgctaccaggagctggtggacctgatcagcagcaagcgctcaagcagcttcaagcgg
gccatcgccaatggacagcgggcactgccccaggacgggctgctggacgagccaggactg
ggtgtctacaagcggttcgtgcgctacgtggcctacgagatcctgccccgagaggtggac
cgccactggtacttctaccggcaccgcagctgcccaccccctgtgtttatggcttcggtc
accctcgcccagatcatcgtgttcctgtgctacggggcccgtctcaacaagtgggtgctg
cagacctaccaccctgagtacatgaaaagccccctcgtataccaccccggccaccgtgct
cgggcttggcgctttctcacctacatgttcatgcacgttgggctggagcagctggggttc
aacgcactcctgcagctgatgatcggggtgcccctggagatggtgcatggcctgctccgc
atcagcctgctctacctggctggtgtgctggcaggctccctgaccgtctccattactgac
atgcgggcccctgtggtggggggctccggcggggtctacgccctgtgctctgcacacctg
gccaatgtcgtcatgaactgggctgggatgagatgtccctacaagctgctgaggatggtg
ctggccctggtgtgcatgagctccgaggtgggccgggccgtgtggctgcgcttctccccg
ccactgcctgcctcgggcccacagcccagcttcatggcacacctggcgggcgcggtggtg
ggtgtcagcatgggcctgactatcctgcgcagctatgaggaacgcctgcgagaccagtgt
ggctggtgggtggtgctgcttgcctatggcaccttcctgctcttcgccatcttctggaac
atctttgcctacgacctgctgggtgcccacattcccccgccaccctga
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