Phocoena sinus (vaquita): 116739607
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Entry
116739607 CDS
T07759
Symbol
GIGYF1
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116739607 (GIGYF1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116739607 (GIGYF1)
Surveillance factors
Other surveillance factors
116739607 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
PRTase_3
Motif
Other DBs
NCBI-GeneID:
116739607
NCBI-ProteinID:
XP_032459948
LinkDB
All DBs
Position
15:81232881..81244183
Genome browser
AA seq
1080 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKESKVPDEL
QDKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLGGASRGRGS
TRSRGRGRGDSCFYQRSIEEGDGAFGRNPREIQRSQSWDDRSERRFEKSARRDGARSGFD
EGGAGPRKEHARSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSASPDGGPRSAGW
REHGDRRRKFEFDLRGDRGGCGEEEGRGGGGGSHLRRCRGPDSFDDDKDGLPEWCLDDED
EEMGTFDASGAFLPVKKGPKEPIPEEQELDFQGLEEEEEEPSEGLDEEGPEAGGKELTPL
PPQEEKSSSPSPLPSLGPLWGGNGEGDDALEKDLPAAEGDDMRAVQLSPGVGSPPGPPGD
LEDDEGLKHLQQEAEKLVASLQDSSLEEEQFTAAIQAQGLRHSAAAPALPLSHGAARKWF
YKDPQGEIQGPFTTQEMAEWFQAGYFSMALLVKRGCDEGFQPLGEVIKMWGRVPFAPGPS
PPPLLENMDQERLKKQQELAAAALYQQLQHQQFLQLVGSRQLPQCALREKAALGDLPPPP
PPQQLTAFLQQLQALKPPRGGDQNLLPTMNRSLSAPDSGPLWDIHTSASSQSGGEASLWD
IPINSSTQGPILEQLQLQHKFQERREVELRAKREGGEERKRREEKRRQQQQEEQKRRQEE
EELFRRKQVRQQELLLKLLQQQQAVAAVPVPPAPSSPPPLWAGLAKQGLSMKTLLELQLE
GERQMHKQPPPREPSRAQAPNHRVLGGLGATPLNQWVSEAGPLWGGPDKSGGSSGLGLGE
DTLKSSGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGF
TQWLXADAAHMSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERR
AKQKASQQRQQQQEAWLSSGSLQTAFQTNHSTKLGSGEGSKAKRRALMLHSDPSILAWVG
ELKPSFPWLQGTPCMDLLVRSRAWMTTDQPVPPAPWAIGQGQQQRLGPLGPQPAGSPRGA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagaccctcaactttgggcctgagtggctgagggccctttctagtggtggc
agtgtggcctccccacccccatcccccgccatgcccaaatacaagctggccgactatcgc
tacgggcgagaggagatgctggccctctatgtcaaggagagcaaggtccccgatgagctg
caagacaaggagtttgctgcggtgctgcaggaggagccgctgcagcccctggcgctggag
cctctgactgaggaggagcagagaaacttctccctgtcagtgaacagtgtggctgtgctg
aggctgatggggaaaggggctggtcccccgctaggtggcgcctcccgtggcaggggcagc
acgcggagccgaggccgcggccgtggtgacagttgcttttaccaaagaagcattgaagaa
ggcgatggggcctttggccgaaacccccgggagatccagcgtagccagagttgggatgac
agaagcgagaggcggtttgagaagtcggccaggagggatggagcgcgatccgggtttgat
gagggaggggctggcccgaggaaggagcatgcccgctcagatagcgagaactggcgttct
ctccgggaggaacaagaggaagaggaggagggcagctggagacttggggcaggaccccgg
cgagatggcgaccgctggcgctctgccagccctgatggcggcccccgctctgctggctgg
cgggaacatggggaccggcgtcggaagtttgaatttgatttgcgaggggatcgaggaggg
tgtggtgaagaggaggggaggggtggggggggcggctctcacctccggaggtgccgaggg
cctgacagctttgatgacgacaaggatgggctcccggagtggtgtctggacgatgaggat
gaagagatgggcaccttcgatgcctccggggccttcttgcctgtcaagaagggccccaag
gagcccattcctgaggagcaggagcttgacttccagggtctggaggaagaggaggaagag
ccttccgaagggctggacgaggaggggcctgaggcgggtgggaaagaactgaccccactg
cctcctcaggaggagaagtccagctccccatccccactgcccagcttgggcccactctgg
ggaggcaacggggaaggcgatgatgctctggagaaagacctgccggcagctgaaggagat
gatatgagggcagtgcagctgagtcctggggtgggttcaccccctggcccacctggagat
ctggaagatgatgaaggcttgaagcacctgcagcaggaggcggagaagctcgtggcctcc
ctgcaggacagctccctggaggaggagcagttcacagccgccatccaggcccagggcctg
cgccactctgccgctgcccccgccctccccctcagccatggcgcggcccggaagtggttc
tacaaggacccgcagggagagatccaaggccccttcacgacacaggagatggcggagtgg
ttccaggcgggctatttctccatggccctgcttgtgaagcggggctgtgatgagggcttc
cagccgttgggtgaggtgatcaagatgtggggtcgtgtgccctttgcccctgggccctcg
ccgcccccactgctggaaaacatggaccaggagcggctgaagaagcagcaggagctggcg
gcagccgccttgtaccagcagctgcagcaccagcagtttctgcagctggtcggcagccgc
cagctcccccagtgtgcgctccgggaaaaggcggctctgggggacctgccgccgccgccg
ccgccgcagcagctcaccgcgttcctgcagcagctccaagctctcaagccccccaggggt
ggggaccagaacttgctcccgacgatgaaccggtccctgtcagcgccagactcgggcccc
ctctgggacatacatacctcagcctcatcacagtcaggcggtgaggccagtctttgggac
ataccaattaactcttcgactcagggtccaattctagaacaacttcagctgcagcataaa
ttccaggagcgcagagaagtggagctcagggcgaagcgggagggaggagaggagcgcaag
cgccgagaggagaagcgccgccagcagcagcaggaggaacagaagcggcggcaggaagaa
gaggagctgtttcggcgcaagcaggtgcggcagcaggagctcctgctgaagctgctccag
cagcagcaggcggtggctgccgtccctgtgcctcctgcgcccagttctccgccccccctg
tgggccggcctggccaagcagggcctgtcgatgaagacgctgctggagctgcagctggag
ggcgagcggcagatgcataagcagcccccgcctcgggagccttcgcgggcccaggctccc
aaccaccgcgtgctcgggggcctgggcgccacccccctgaaccagtgggtgtctgaggct
gggccgctgtggggcgggcccgacaagagtgggggcagcagcggcctggggctcggggag
gacaccctcaagagcagcgggagcctggcccgcagcctgggcctgaagaacagccgcagc
agcccctctctcagtgactcgtacagccacctgtcgggtcggcctgtgcgcaaaaagacg
gaagaggaagagaagctgctgaagctgctccagggcatcccccggccccaggatggcttc
acccagtggttgtgagcagatgctgcacacatgagcaccacgggcagcctggacgtgccc
atggctgtagcgatcctcaaggaggtggaatccccctacgacgtccatgactatatccgt
tcctgcctgggggacacgctggaagccaaagaatttgccaaacagttcctggagcggagg
gccaagcagaaggccagccagcagcggcagcagcagcaggaggcttggctgagcagtggc
tccctgcagacagcctttcagaccaaccacagcaccaaactcggctctggggagggcagc
aaggccaagaggcgggcactgatgctgcactcggaccccagcatcttggcctgggtgggt
gagctcaaacccagcttcccctggcttcagggtactccctgcatggaccttctggtgaga
tcgagagcgtggatgactactgaccagcccgtcccaccagcaccctgggctataggccag
gggcagcagcaacggcttggacccctgggtccccagcctgcaggctccccgcgaggagca
tag
DBGET
integrated database retrieval system
