Phocoena sinus (vaquita): 116739617
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Entry
116739617 CDS
T07759
Symbol
ARPC1A
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
psiu04517
IgSF CAM signaling
psiu04530
Tight junction
psiu04666
Fc gamma R-mediated phagocytosis
psiu04810
Regulation of actin cytoskeleton
psiu05100
Bacterial invasion of epithelial cells
psiu05132
Salmonella infection
psiu05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116739617 (ARPC1A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116739617 (ARPC1A)
09144 Cellular community - eukaryotes
04530 Tight junction
116739617 (ARPC1A)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116739617 (ARPC1A)
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
116739617 (ARPC1A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116739617 (ARPC1A)
05135 Yersinia infection
116739617 (ARPC1A)
05100 Bacterial invasion of epithelial cells
116739617 (ARPC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116739617 (ARPC1A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116739617 (ARPC1A)
Membrane trafficking [BR:
psiu04131
]
Others
Actin-binding proteins
Arp2/3 complex
116739617 (ARPC1A)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
116739617 (ARPC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Rax2
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
116739617
NCBI-ProteinID:
XP_032459987
Ensembl:
ENSPSNG00000010796
UniProt:
A0A8C9BSN6
LinkDB
All DBs
Position
15:complement(82237010..82263805)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVS
TLKTEFLPLLSVRFISENSVVAAGHDCCPMLFSCDDRGCLTFVSKLDIPKQSIQRNMSAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcatcagtttttactagagccaattacctgtcatgcctggaacagggatcgt
acccagattgcccttagccccaataaccacgaagttcacatctacaagaagaacgggagc
cagtgggtgaaagctcatgaactcaaggagcacaacggacacatcacaggtatcgactgg
gctcccaagagtgaccgcatcgtcacttgtggggctgaccgcaatgcctacgtgtggagt
caaaaagatggtgtctggaagccaaccctggtgatcctgagaattaaccgtgcagccact
tttgtcaagtggtccccgctagagaacaaatttgccgtgggcagcggagcacgactcatt
tctgtttgttacttcgagtccgaaaatgactggtgggtaagcaagcacattaaaaaaccc
attcgctccacggtcctcagcttggattggcatcccaacaatgtcttgctggcagcagga
tcctgtgatttcaaatgcagagtgttttctgcctacattaaagaagtggatgagaagcca
gccagtacaccctggggcagcaagatgccttttggtcagctgatgtcagagtttggtggc
agtggcactggcggctgggtgcacggggtcagcttttccgccagcgggagccgcctggcc
tgggtcagccacgacagcaccgtgtccgttgccgatgcctcaaaaagtgtgcaggtctca
actctgaagacggagttcctgcccctcctaagtgtgcgcttcatctcggagaacagcgtc
gtggccgctggccatgactgctgccccatgctctttagctgcgacgaccgcggctgcttg
accttcgtctcgaagctagacatcccgaaacagagcatccaacgcaacatgtcggccatg
gagcgcttccgcaacatggacaagcgggccacgaccgaggaccgcaacacggccctggag
acgctgcaccagaacagcatcactcaagtgtctatttatgaggtggacaagcaagattgt
cgcaaattttgcactactggcatcgatggagccatgaccatttgggatttcaagacctta
gagtcttctatccagggccttcggataatgtga
DBGET
integrated database retrieval system
