Phocoena sinus (vaquita): 116739734
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Entry
116739734 CDS
T07759
Symbol
LRWD1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116739734 (LRWD1)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116739734 (LRWD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
WD40
LRR_8
WD40_CDC20-Fz
WD40_Prp19
LRR_1
WD40_RFWD3
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
LRR_14
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_SPT8
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
116739734
NCBI-ProteinID:
XP_032460286
Ensembl:
ENSPSNG00000006367
LinkDB
All DBs
Position
15:complement(79990408..79997159)
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AA seq
651 aa
AA seq
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MGPLSARLLIQRGRPKCDRLGKIRSLDLSGMNLLSEHLDPKLLSRLKQLQELDLSNNQLE
TLPANLGLSHLRILRCANNQLGDVTVLCQFPQLEELSLEGNPFLTVSDNLKVSFLLPKLR
KVNGKDASSTCSQVENLNRELTSRVTAHWEKFMAALSPDEEAEKAQADFVRSAVRDVRYG
PESLSDFTQWRVRMISEELLASGGTQVHEANISERPPKATAIQEPRAGPVASKRPGDGPV
NVSPNKRVCTSPLAQVEGSPVGSAGSQTALQLEPLHFLQCHSKNNSPRDLETQLWACAFE
PAWDEGQAGATSQTVATCGGEAVCVIDCQTGIVLHKYKAPGEEFFSVAWTALTVVTQAGH
KKRWSVLAAAGLRGLVRLLHVRAGFCCGLIRAHKKAIATLCFSPTHETHLFTASYDKRII
LWDIGVPNHDYEFQASQLLTLDTTSIALRLCPVASCPDAYLLAGCEGGCRCWDVRLDQPQ
KRRVCEVEFVFSEGSEATGRRVDGLAFVNEDVVASKGSSLGTICLWSWSQTWQGRGSRST
VAVVVLARLQWSPTELAYFSLSTCPDEGMVLCGDEEGNVWIYDVRPLVAQRPPPPATPQA
PTQILKWPQPRALGQTVSRTMVNTVVADPTFTYLTALTDSNIVAIWRRNQP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggccccctctcggcgcggctgctgatccagcgggggcgacccaagtgcgaccggctg
gggaagatccggagcctggacctgtcagggatgaatctgctctcagagcacttggacccc
aagctgctgagccgcctgaagcagctgcaagagctggacctctccaacaaccaactggag
acgctgcccgccaacctgggcctgtcccacctgcgcatcctccgctgcgccaacaaccag
ttgggcgacgttactgtcttgtgccagttcccacagctcgaggagctcagcctggagggc
aacccctttctgacagtcagcgacaacctgaaagtttccttcctcctgcccaagctccgt
aaggtcaacggcaaggacgcttcctccacttgctctcaggtggagaacctgaaccgggag
ctgaccagcagggtcacagctcactgggagaagttcatggccgcactgagcccagacgag
gaggctgagaaggcccaggcagactttgtgaggtcggccgtcagagatgtccgctatggg
cccgagtccctcagcgacttcacccagtggagggtgcggatgatctctgaggagctgctg
gcctctggtgggactcaggtgcatgaggcaaacatctcagagaggcccccaaaagccact
gctatccaggagcctagggccgggccagtggcctcgaagcggccaggtgatggcccagtc
aacgtctctcccaacaagcgggtgtgcacctccccgttggcccaggtggagggcagccct
gtgggctctgctggcagccagactgccctgcagctggagcccctgcacttcctgcagtgc
cacagcaagaacaacagccctcgtgacctggagacccagctctgggcctgcgccttcgag
ccagcctgggacgaggggcaggcaggggccacatcccagaccgtggccacgtgtggcggg
gaggccgtgtgtgtgatcgactgccagacgggcatcgtactgcacaagtacaaggcgccc
ggtgaggagttcttctcagtggcctggacggccctgacggtggtcacacaggcaggccac
aagaagcgctggagcgtgctagcagctgcaggcctgcggggcctggtccggctgctgcac
gtgcgggccggcttctgctgcgggctcatccgggcccacaagaaggccattgcgactctc
tgtttcagccccacacacgagacccacctcttcacggcctcctatgacaagcggatcata
ctctgggacatcggggtgcccaaccatgattacgaattccaggccagccagctgctcaca
ctcgacaccacctccatcgccctgcgcctctgccccgtcgcctcctgcccggatgcctac
ctgctggccggctgcgagggcggctgccgttgctgggacgtgcggctggaccagcctcag
aagaggagggtgtgtgaggtggagttcgtcttctctgaaggctctgaggcaactggacgg
agagtggacgggctggcgttcgtgaacgaggacgtcgtggcctccaaagggagtagcctg
ggcaccatctgcctgtggagctggagccagacgtggcagggccggggcagccggtccaca
gtggccgtcgtggtcctggcccggctgcagtggtcgcccaccgagctcgcctacttctca
ctcagcacctgtcctgatgaggggatggtgctctgcggggacgaggagggcaacgtgtgg
atctacgacgtcaggcccctcgtagcgcagaggcccccgccgccggccaccccgcaggcc
cccacgcagatccttaagtggccccagccccgggccctgggccagacagtgagcaggacc
atggtgaacacggtggtggccgaccccacctttacctacctcacggcactgacggactcc
aacattgtcgccatctggaggagaaaccagccttga
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