Phocoena sinus (vaquita): 116739757
Help
Entry
116739757 CDS
T07759
Symbol
NSMCE1
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116739757 (NSMCE1)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116739757 (NSMCE1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116739757 (NSMCE1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Atypical E3
116739757 (NSMCE1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116739757 (NSMCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-RING_2
C1_1
AcMNPV_Ac75
AbiJ_NTD3
Terminase_4
Motif
Other DBs
NCBI-GeneID:
116739757
NCBI-ProteinID:
XP_032460343
Ensembl:
ENSPSNG00000006679
UniProt:
A0A8C9BHP2
LinkDB
All DBs
Position
15:complement(70503845..70544581)
Genome browser
AA seq
266 aa
AA seq
DB search
MQGSTRRMGVMTDVHRRFLQLLMTHGVLEEWDVQRLQKHCYKVHDRTATVEKLEDFINNI
NSVLESLYIEIKKGVTEDDGRPIYALVNLATTSISKMASDFAENELDLFRKALELIIDSE
TGFASSTNILNLVDQLKGKKMRKKEAEHVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYI
RETYPDAVKVCTICHSLLIQGQSCETCGIRMHLPCVAKYFQSHSELRCPHCKDYWPHEIP
EVFDPEKEREASISKSNKRSLRSRQH
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagcacgaggagaatgggcgtcatgactgatgtccaccggcggttcctgcag
ctgctgatgactcacggcgtgctggaggagtgggacgtccagcgcttgcagaagcactgc
tataaggtccatgaccgcactgctaccgtagagaagttggaggacttcatcaacaacatt
aacagtgtcttggagtctttgtacatcgagataaagaaaggcgtcacggaagatgacggg
agacccatttatgcgctggtgaatcttgcaacaacttcaatttctaaaatggcctcagat
tttgcagagaatgagctggatctgtttagaaaggctttggaactgattattgactcagaa
actggctttgcatcttccacaaatattttgaacctggttgatcagcttaagggcaagaag
atgaggaagaaggaagccgagcatgtgctgcagaagttcgtacaaaacaaatggctgatt
gagaaggaaggggagttcaccctgcacggccgggccatcctggagatggagcagtacatc
cgggagacgtaccccgacgccgtgaaagtctgcaccatctgtcacagcctcctcatccag
ggtcaaagctgcgagacctgtggaatcaggatgcacttgccttgtgtggccaagtacttc
cagtcccattcggagctgcgctgcccccattgtaaagactactggccccacgagatacca
gaagtctttgaccccgagaaggagagggaggccagcatctccaaatcgaacaaaaggtcc
ttgcgatccaggcagcactag
DBGET
integrated database retrieval system
