Phocoena sinus (vaquita): 116739758
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Entry
116739758 CDS
T07759
Symbol
ZNFX1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116739758 (ZNFX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
PhoH
DEAD
nSTAND3
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
116739758
NCBI-ProteinID:
XP_032460347
Ensembl:
ENSPSNG00000021759
UniProt:
A0A8C9ED03
LinkDB
All DBs
Position
15:12130987..12158939
Genome browser
AA seq
1918 aa
AA seq
DB search
MEDRRPCPEARPRNPHINHRGPVDGELPPRARNQADNPPASALRGGANQPARHPRANNHP
VPHRQREERFGAVGRNPHQGRRNQEGHASDEPRGQRHGQENDTRQRNGNQEGRNRRPPRS
GENFQQWRNPHQKPAEQPQQVKKLGYKFLESLLQKDPSEVVITLATSLGLKELLSHSFMK
SNFLELICQVLRKACSSKMDRHSVLHVLGILKNSTFLRVCLPAYVVGMSTESIPHVRNQY
PEHISNIISLLQDLVSVFPASSVQETSMLISLLPASLNALRASGVDIGEETEKNLEKVQT
IIKHLQEKRREGTLRVDTYTLVQPEAEDHVESYRTMPIYPTYNEVHLDERPFLRPNIISG
KYDSTAIYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDTRIITPV
CSSTGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREQEDLCRG
IVQLCFNEQSQQLLTDVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECD
SYVKEPRYLLMGGRYDFTPLIKNPSATGESLRNTEGLRHSRVNVLDPSQWPSKETLKLDD
SQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNEAVWQISLQKFPILVVCYTNH
ALDQFLEGIYKCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMT
QMKESEQELHEGAQTLECTMRGVLREQHLEKYISLQHWKSLMNGPIQNSEWVCFQGWKHS
MMLEWLGLGVGSFTQSVAPAGPENTAKAEGEEEEEEGEEEGSLIEIAEEAELIQADRMIE
EEEVVRPRRRKKEENGAVQELAKVLLAMRLDNYGPGTAAGQEQAAGEWENQRNQKKKMKK
KVKVELRKLNTMTEAEANEIQDVWQLDLNSRWQLYRLWLQMYQADTRRKILSYERQYRTS
AERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVILEEAAEVLEAHTIAT
LSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEI
ARLLTPHVYQDLENHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEARFVVE
LCKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVKVHVVDKYQGEENDIVLLSL
VRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGSA
LRLCCQNHPVTHTLVSKASDFQNVPEGGCSLPCEFRLGCGHVCTRACHPYDSLHKEFQCM
KPCQKVICQDGHRCPLVCFQECEPCQVKVPKVILRCGHEQMVPCSMPESDFCCQEPCPKV
LKCGHRCSHPCGEDCVQLCSEKVTVKLKCGHSQKVKCGHVEDLRYDLPVKCTTKCGTILD
CGHPCPGSCHSCFKGRFHERCQQPCNRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCK
KKCGELCSPCVEPCDWRCQHYQCTKLCSEPCDRPPCYVPCTKLLACGHPCIGLCGEPCPK
KCRVCHQEEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIKLKVCP
VCQVPIRKNLRYGTSIKQRLEEIEVVKEKILGSAGEIAVSQERLKALLERKNLLYQLLPE
DFLMLKEKLAQKNLSVKDLGLVENYISFYDHLAGLYDSLKKVHVLEQKQVRTRLDQVHEW
LAKKRLSFTSQELDDLQSEIQRLTYLVNLLTRCRIAEGKVRGSVAEEVSRVRKILEGTCK
FTREDEQLVQRKMEALKATLPCSGLGISEEERAQIVKAIGYPRGHWFKCPNGHIYVISDC
GGAMQRGTCPDCKEVIGGVNHTLERSNQLASEMDGAQHPAWSDTANNLMNFEEFQRMM
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgaagaccttgtccggaggcccggcccaggaatcctcatattaaccacaga
gggcctgtggatggagaattaccaccaagagctagaaatcaggccgataatccaccggcc
agtgctctcagaggaggagccaaccagcccgcaaggcatcctagggccaacaaccatcct
gttcctcatcggcaaagagaagagaggtttggggcagtgggcaggaacccacatcaggga
aggagaaaccaggaggggcatgccagtgatgaacctagaggccaaagacatggtcaggaa
aatgacaccaggcagagaaatggcaaccaggagggaaggaaccgcagaccaccacgatcc
ggtgaaaactttcagcagtggcggaacccccaccaaaagcctgcagaacagccacagcag
gtgaagaaactgggctacaagttcctagaaagtcttctgcagaaagatccctctgaggtg
gtcatcacacttgccacaagtttaggactgaaggagctcttgtctcattcttttatgaag
tccaacttccttgagctcatctgccaagttcttcggaaggcttgcagttccaaaatggac
cgccacagcgttctccatgttctgggcatattgaagaattccacattcctcagagtctgc
ttgccggcttatgtggtagggatgagcactgaatccatcccccatgttcgaaaccagtat
ccagaacacattagcaacatcatctccctcctccaggaccttgtaagtgtcttccctgcc
agctctgtgcaggaaacttccatgctcatttctctcctgccagcttctcttaatgctttg
agagcctctggtgttgacataggagaagagacagagaagaacctggaaaaggtccagacc
atcatcaaacatctgcaggaaaagagacgagagggcactttaagagtggacacctacact
ctcgtgcagcctgaggcagaagaccatgttgagagctaccggaccatgcccatttacccc
acttacaatgaagtgcacttggatgagaggccattccttcgccccaacatcatttctgga
aaatacgacagcactgctatctatctggatacccacttccgactcctgcgagaggatttt
gtcagacccctgcgggagggcattttggaacttctccaaagctttgaagaccaaggcctg
aggaagagaaagtttgatgacatccgaatctactttgataccaggattatcacccccgtg
tgttcgtcaacaggcattgtctacaaggtgcaatttgacacaaaaccactgaagtttgtt
cgctggcagaactccaagcgattgctctatgggtccttggtgtgcatgtccaaggacaac
tttgagacgtttctttttgccaccgtgtctaatcgggagcaggaagatctctgccgagga
attgtccagctctgcttcaatgagcagagccaacagctgctaacagatgtccagccctct
gactctttcctcatggtggagacaactgcatactttgaggcctataggcacgtcctggaa
ggactccaggaagtccaagaggaagacgtccccttccagaggaacatcgtggaatgtgac
tcttatgtgaaggagccaaggtacttgctaatggggggcagatatgatttcactccctta
ataaagaatccctctgccactggggaatctctgaggaatactgagggcttgagacattcc
agagttaatgtcttagaccccagccagtggccctcaaaagaaaccctgaagctggatgac
tcccagatggaagccttgcagtttgctctcacaagagaactggctattattcaaggacct
cctggaacaggcaaaacctatgtgggtctaaaaattgttcaggcccttctaaccaacgag
gctgtttggcaaattagcctccagaagttccccatcttggttgtgtgttatactaatcat
gctttggaccagtttctggaaggcatctataagtgtcaaaagaccagcattgtgcgggta
ggtggaaggagcaacagtgaaatcctgaagcagttcaccctgagggagctgaggaacaag
cgggaattccgccgcaacctccccatgcacctccgaagggcctacatgagtatcatgaca
caaatgaaagagtcagagcaagagctgcatgaaggggcccagaccctggagtgcaccatg
cgtggcgtactacgggaacagcatctggagaagtacatctccctccaacactggaaaagc
ctgatgaatggaccaatacagaatagcgaatgggtttgcttccagggctggaagcattcc
atgatgctggagtggctgggtctaggtgttggttctttcacccaaagtgttgctccagca
ggacctgaaaatacagccaaggcagaaggggaggaggaggaggaagaaggggaagaggag
ggttcgctgattgagatcgcagaggaggctgaactgattcaagcagaccggatgattgag
gaggaagaggtggtgaggccccggcgacggaagaaggaagagaatggggcagtacaggag
ttggctaaagtgcttctggccatgaggctagacaactatggccccgggacagcagccggg
caggagcaggctgcaggagagtgggagaaccagcgcaaccagaaaaagaaaatgaagaag
aaggtgaaggttgaacttcgcaagctgaacaccatgactgaggccgaggccaatgaaatc
caggatgtttggcagctggacctgaattctcgctggcagctttataggctgtggctacag
atgtaccaggctgacacccgccgaaagatcctcagctatgaacgtcagtaccgcacatca
gcagagagaatggctgagctgagactccaggaagacctgcacatcctgaaagatgcccaa
gttgtaggaatgacaacaacaggtgctgccaaatatcgccagatcctgcagaaggtggag
cctcggatcgtcatcctggaagaggctgctgaagtccttgaggcccacaccattgccacc
ctgagcaaagcttgccagcacctcattctgattggggaccaccagcagctgcgccccagt
gccaatgtgtatgatctggccaagaatttcaaccttgaggtgtccctctttgaacggctg
gtgaaagtaaacattccctttgtccgtctgaactaccagcaccgcatgtgccctgaaatt
gcccggcttttgacaccccacgtttaccaggatctggaaaaccatccctctgttctcaaa
tacgagaagattaagggggtctcttccaaccttttctttgtagaacacaactttcctgaa
caggaaatccaagaaggcaaaagccaccagaaccagcacgaggctcgctttgtggtggag
ctgtgcaagtacttcctgtgtcaggaatacctgccctcccagatcaccatcctcaccacc
tataccgggcagctcttctgcctgcgcaaactcatgcctgccaagacatttgctggtgtc
aaggtccatgtggtggacaaataccaaggggaggagaatgacatcgtcctcctctcacta
gtgcgcagcaaccaggaaggcaaggtgggttttctccagatatccaaccgcatctgcgtg
gccttgtcccgtgccaagaagggaatgtattgcattggaaacatgcagatgctggccaag
gtgcccttgtggagcaagatcatccatacccttcgagagaacaatcaaataggctctgcc
ctccggctgtgctgccagaaccaccctgttacccacactttagtatccaaagcttctgac
ttccaaaacgtgcccgaaggaggctgcagcctaccctgtgagttccggctgggctgtggg
cacgtctgcacccgtgcctgccacccctatgactccttgcacaaggagttccagtgcatg
aagccatgccagaaggtgatctgccaagacgggcaccggtgcccccttgtttgcttccag
gagtgtgagccttgtcaggtgaaggtgcccaaagtcattctccggtgcggccatgaacaa
atggtcccttgttccatgcctgagtcagatttctgctgccaagagccttgccccaaggtc
ctgaaatgtgggcacaggtgcagccacccatgtggtgaagactgtgtgcagttgtgttca
gaaaaggtcaccgtgaaactcaagtgtgggcacagccaaaaggtgaagtgtggccatgtg
gaggacctcaggtatgacctgccagtcaaatgcaccaccaagtgtggcaccatcttggac
tgtgggcatccatgtcccggctcctgccacagctgcttcaaagggcgcttccacgagcgc
tgtcaacagccctgcaatcgcctgctcatctgttcacacaagtgccaggagccgtgcatt
ggtgagtgcccgccctgccagcggacctgtcagaaccgctgcgtccacagccagtgcaag
aaaaagtgtggggaactgtgcagtccctgtgtggaaccctgtgactggcgctgccagcac
taccagtgcaccaaactctgctctgagccctgtgacagacccccctgctacgtgccttgt
actaagctgctggcttgcggccacccctgcattggtttgtgtggggaaccatgccccaag
aagtgccgtgtctgccaccaggaagaagtcacccaaatcttctttggctttgaggatgag
ccagatgcccgctttgtacagctggaagactgcagccacatctttgaggtgcaagccctg
gaccgctacatgaacgagcagaaggatgacgaagttgccatcaagttgaaggtctgccct
gtctgccaggtgcccatccgcaaaaatctgaggtatggaactagcatcaaacagcggctg
gaagagattgaagttgtcaaggaaaagatcttgggctcagcaggggaaattgcagtcagc
caggaacgacttaaggccctactggagaggaagaatctcctttaccagctgctccctgaa
gacttcctgatgttgaaagagaagctggcccagaaaaatctgtcagtgaaggacctgggc
cttgttgagaattatatcagcttctatgaccacctggctggcctatatgattccctgaaa
aaagtgcatgtcttagaacagaagcaggtgaggactcggttagaccaggtccatgagtgg
ctggccaagaagcgtttgagcttcaccagccaggaattggatgacctccaaagtgaaatc
cagaggctcacatacttggtgaacctgctgacccgctgcaggatagcagaggggaaggtg
agaggcagcgtagcagaagaggtctccagagtccggaagatcctcgaggggacgtgtaag
ttcacccgggaggatgaacagcttgtgcagagaaagatggaggctctgaaagccaccctt
ccctgctctggcctgggcatctcagaggaagaacgagcgcagatcgtcaaagccataggt
taccctcgtggccactggttcaagtgccccaatggccacatctatgtgattagtgattgt
gggggagccatgcagaggggcacgtgtcctgactgtaaggaggtgattgggggcgtgaac
catactctggaaagaagcaatcagcttgcttccgagatggatggggcccagcaccctgcc
tggtctgacacggccaacaacctgatgaactttgaggagttccagaggatgatgtag
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