Phocoena sinus (vaquita): 116739761
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Entry
116739761 CDS
T07759
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04217
Necroptosis
psiu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116739761 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116739761 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116739761 (RBCK1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116739761 (RBCK1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116739761 (RBCK1)
Multi subunit Ring-finger type E3
LUBAC complex
116739761 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
zf-RanBP
ubiquitin
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116739761
NCBI-ProteinID:
XP_032460350
Ensembl:
ENSPSNG00000007838
LinkDB
All DBs
Position
15:27478776..27497335
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AA seq
550 aa
AA seq
DB search
MDEKIKKAEEVAQRLTRAVAGGDEQVAMQCAIWLAEQRVPLNVQLKPEVSLTQDIRLWVS
VEDAQLHTATIWLTVRPDMTVASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVR
RNGASAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPVPPKPGGPQE
PGRGQNDAAPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARL
AGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECPVCYSVLAPGEAVVLREC
LHTFCRCGPDPTPSDVVPHGCAVPMAERGWGAVLLHLLGRPQKPARECLQGTIRNSQEAE
VACPFIDNTYSCSGKLLEREIRALLSPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWC
FFEDDVNEFTCPVCFHINCLLCKAIHEQMNCKEYQDDLALRAQNDVAAWQTTEMLRAMLQ
QGEAMHCPQCQIVVQKKDGCDWIRCTVCHAEICWVTKGPRWGPGGPGDTSGGCRCRVNGS
PCHPSCQNCH
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaagatcaagaaagctgaggaggtggcccagagactcacccgagcagtggct
ggcggggatgaacaggtggctatgcaatgtgccatatggctggcagagcaacgggtgccc
ctgaacgtgcaactgaagcctgaggtctccctgacacaggatatcaggctgtgggtgagc
gtggaggatgcgcagttgcacacggccactatctggctcacggtgcggcctgacatgacg
gtggcctccctcaaggacatggtgttcctggactatggctttccgccaaccctgcagcag
tgggtgattgggcagcgcttggcccgggaccaggagaccctgcactcccacggggtgcgg
cggaacggggccagtgcctacctctatctgctgtcagcctgcaacacctcactcaaccct
caggagctgcagcgggagcggcagctgcggatgctggaggatctgggcttcaaggacctc
acgctgcagccacggggccccctggagccagtccctccaaagcctgggggcccccaggag
ccggggcgggggcagaacgacgccgcgccagagcccccgccggtgggctggcagtgccct
ggctgcacgttcatcaacaagcccacgcggcccggctgcgagatgtgctgccgggcgcgg
cccgaggcctaccaggtccccgcctcgtaccagccggacgaggaggagcgagcgcgtctg
gccggtgaggaggaggcgctgcgccagtaccagcagcggaagcagcagcagcaggagggg
aactacctacagcacgtgcaactggatcagcggagcctggtgctgaacaccgagcctacc
gagtgtcccgtatgctactcggtgctggcgcccggcgaggccgtggtgctgcgtgagtgt
ctgcacaccttctgcaggtgcggccctgaccccacccccagcgatgtagttcctcacggc
tgcgcagtacccatggctgaaagggggtggggcgcagtactcttacatctccttggacgc
ccacagaaacctgcgagggagtgtctacagggcaccatccgcaacagccaggaggccgag
gttgcctgccccttcattgacaacacctactcatgctcgggcaagctgctggagagggag
atccgggcgctcctgagccctgaggattaccagcgatttctggacctgggcatctccatt
gcggaaaaccgcagtgccttcagctaccactgcaagaccccggactgcaaaggatggtgc
ttctttgaggatgacgtcaacgagttcacctgccctgtgtgtttccacatcaactgcctg
ctttgcaaggccatccacgagcagatgaactgcaaggagtaccaagacgacctggccctg
cgggctcagaacgacgtggctgcctggcagacgacggagatgctgagggccatgctgcag
cagggcgaggccatgcactgcccacagtgccagatcgtggtgcagaagaaggacggctgt
gactggatccgctgcactgtctgccacgccgagatctgctgggtcaccaagggtcctcgc
tggggccccgggggcccgggagacaccagcgggggctgccgctgccgggtgaatgggtct
ccttgccaccccagctgtcagaactgccactga
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