Phocoena sinus (vaquita): 116739815 Help Entry 116739815         CDS       T07759                                  Symbol COL20A1 Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism psiu  Phocoena sinus (vaquita) Pathway psiu04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:psiu00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     116739815 (COL20A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 VWA Collagen VWA_2 Pur_ac_phosph_N Laminin_G_2 Motif Other DBs NCBI-GeneID:  116739815 NCBI-ProteinID:  XP_032460433 LinkDB All DBs Position 15:complement(691258..720803) Genome browser AA seq 1449 aa AA seqDB search MVCQPGTKRHSGGPGGPALEAVFSWSKLPSAREPPALMHMALRLTGLRCAVLSGITSRGR DAEGAVGRRRAADLLIQEAPPGLWDAGPWGQEGQWLEASGPHTMSIRVCPRLGVGLWLWL GVTLGLGQGQASGRLRLVVLPEDRLQMKWRESEGSSLGYLVQVKPRAGDLEQEVMLTTKT PKATVGGLSPSKGYTLQIFELTGSGNVLLAQREFVIKDLKSSSASRSSRRPLGAALQPSP SHEGSPDLDPPVALAPSQDLPTPAGPQFRCTSPTPVDMIFLVDGSWSIGHSHFQQVKDFL ASIIEPFEIGPDKVQVGLTQYSGDPQTEWDLNAFGTKEEVLAAVRGLQYRGGNTFTGLAL THVLEQNLKPVAGLRPEAAKLVILVTDGKSQDDARTAGHVLKDLGVDVFAVGVKNADDAE LRLLASQPLDITVHSVQDFRQLGSLAGLLSRLVCQKVQGRRLRSGPVTPAAAAPALDPLS APTGLVLTRVTSSSIHLSWTPAPRPPLKYLIVLRPSKGGAPREVVVEAPASSAELHNLTS STEYLVSVLPVYEAGVGEGLQGPVTTAPLPPPQVLTLAAVMPRAIHLTWQPSAGATQYLV QCSPTSPKGKEEGREVRVGQPEALLDGLAPGRDYEVWVRSLRGAETSEAQSIRARTPALA PPRHLSFSDVSHDSARVSWEGTARPVRLFRVSYVSSKGGHSGQTEAPGSATSVTLGPLSS FTVYTVRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVIELPGDEVQLEWAAAAASGVLVY QITWTPLGEGKAHKISVPGNLGTAVLPGLGRHSEYEITILAYYRDGAHSDPVSLRYTPRS PPSNLALASESPDSLRVSWTPPSGRVLHYQLSYALASGSGPEKSISIPGPRSHVTLPELL AATKYRVLVSAVYGAGKSVAVSATGRTACPALHPDGSLPGFDLMAAFGLVEKEYASIRGV AMEPSAFGPIRTFTLFKDAQLTRRASDIHLATLPTEHTVVFLLRLLPETPREVFALWQVA AEDFQPVLGVLLDASRKSLTYFRRDPSATLQEATFDLPEVRRIFFGSFHKVHIAVGRSKV RLYVDCRKVAEKPTGEAGSLPTTGFVTLGRLAKARGPRSSSASFQLQMLQIVCSDSWAEE DRCCELPASKDGETCPAFPSACACSSQTPGPPGPQGPPGHPGRDGAPGEQGFPGPRGPPG VKGEKGDHGRPGLQGHPGLQGTPGKVGVQGPKGMRGLEGTAGLPGPPGPRGFQGTAGARG SSGERGPPGAVGPTGLPGPKGERGEKGEPQSLATIYQLVGQASHLLKLHACTHESTRPPM PILEAPRAFGTRREARLPGEGGHGGPRPEDRDADAEMDGEVDEGRRSLWPRCGGRRRGGV GGGGWDDSSAPRAGVDGDGRRRDPSPTAPTTVPQTLSLPCVPPVRTCRPKLAGAVMTPTP APSPVPTTH NT seq 4350 nt NT seq  +upstreamnt  +downstreamnt atggtctgccagcccgggaccaagaggcactcaggagggccaggaggccctgccctggag gccgtgttcagctggagtaagttgccctctgcccgggagccccccgcgctgatgcacatg gccctgaggctgactggtctgagatgtgctgtgctctccggcatcacgtcccgagggcgg gatgcagagggtgcggtgggcagacggagggcagctgacctcctgatccaggaagctccc ccaggcctgtgggacgctggcccctggggacaggagggccagtggctggaggcctccggg ccacacaccatgagcatccgtgtgtgcccccgcctcggggtcggcctctggctgtggctg ggtgtcaccctgggactcggccagggacaagcaagcggccgcctgaggctggtggtgctg cctgaggaccggctgcagatgaagtggagggagtcggaggggagcagcctcggctacctg gtgcaggtgaagcccagggcaggggacctggagcaggaggtgatgctgactaccaagacc cccaaggccacggtggggggcctgagcccctccaaagggtacaccttgcagatcttcgag ctcacgggctcagggaatgtcctgctggctcagagggagtttgtgatcaaagatttgaag agtagctctgctagcaggagcagccggaggccactgggggcagccctgcagcccagcccc tcccacgaggggagcccagacctcgatcccccagtggccttggccccaagccaagacctg cccacgcctgccggaccccagttccgctgcacgtcccccacacccgtggatatgatcttc ctggtggatggatcctggagtattggtcacagtcacttccagcaggtcaaagacttcctg gccagcatcattgagccctttgaaatcgggccagacaaagtccaagtaggcctgactcag tacagcggggatccccagaccgagtgggacctgaatgcctttggcaccaaggaggaggtg ctggccgccgtgcgtggcctccagtacagagggggaaacacgttcacaggcctggccctg acccacgtgctggaacagaacctgaagcccgtggcgggtctccgtccggaggcggccaag ctggtgattctggtgacggacggcaagtcccaggacgacgcccgcactgctggccatgtg ctcaaggatctgggcgtcgacgtctttgccgtgggcgtgaagaacgccgatgatgccgag ctgaggctcctggcgtcccagcctctggacatcaccgtgcacagcgtgcaggacttccgc cagctcggctcgctggccggcctgctcagccgcctcgtctgccagaaggtgcagggcagg cgcctgcgcagcggcccagttacaccggccgcagccgctccggccctggaccccctttcc gctcccaccggcctggtcctgacccgggtgacctcctccagcatccacctgtcctggacc ccagccccgcggccacccctcaagtacctgatcgtgttgcggccttctaagggcggcgcc cccagggaggtggtggtggaggcgcccgcctcgtcggcagagctgcacaacctgacctcc agcacggagtacctggtctccgtgctccccgtctacgaggccggcgtcggtgagggcctg cagggcccggtgaccacagcgcccctgcccccaccccaggtgctgaccctggccgcagtg atgcccagagccatccacctcacctggcagccctcggcaggggccacccagtacctggtg cagtgctcgcccacctcccccaagggcaaggaggaggggagagaggtgcgggtggggcag ccggaggcgctgctggatgggctggccccaggcagggactacgaggtgtgggtgcggagc ctgcgaggggcagagaccagcgaggcccagagcatccgcgccaggacccccgccctggcc ccccccagacacctgagcttctcggacgtgagccatgactcagcccgagtgtcctgggag ggcaccgcgaggcccgtgcgcctgttcagggtcagctacgtctcgagcaagggcggccac tcgggacagacggaggctcctgggagcgccacctcggtcactctgggccccctctcgtcc ttcaccgtctacacggtccgcgtcacctgcctctaccctgggggcagctcctccacactc actggccgcctgaccacacggaaagtccccagcccgagccagctgtcggtgatagagctg cctggggacgaagtccagctggagtgggcggccgcagcggcgtccggcgtgcttgtctac cagatcacgtggacgcccctgggagaggggaaggcccataagatctccgtcccggggaac ctgggcacggccgtcctgcccggcctggggaggcactcggagtatgagatcaccatcctg gcctactacagggatggggcccacagtgaccccgtgtccctccgctacaccccccgtagc ccaccctccaacctggccctggcctcagagtctcccgacagcctgcgggtcagctggacg cccccgagtggccgtgtcctccactaccagctctcctatgcactggcctcaggctcggga cccgagaagtcgatctccattccaggacccagaagccatgtgactctccctgaactgctg gcggccaccaagtaccgggtcctagtctcagccgtctacggagcagggaagagtgtggca gtgtctgccacgggccggacggcctgcccggccctccacccggatggctccctcccaggc tttgacctgatggcagccttcgggctggtggagaaggaatacgcctccatccgtggcgtg gccatggagccctcggcctttggccccatcaggaccttcacgctcttcaaggatgctcag ctgacccgccgggccagcgacatccacctggccaccctccccacggaacacacagtcgtc ttcctcctgcgcctgctccccgagacgccccgcgaggtcttcgcgctgtggcaggtggcg gccgaagacttccagcccgtcctgggggtcctgctggacgccagcagaaaatcgctgacc tacttccgccgtgaccccagcgccaccctgcaggaggccaccttcgacctgcccgaagtg aggaggatattctttgggagcttccacaaggtgcacatagccgtgggccgctccaaggtc aggctctacgtggactgccggaaggtggctgagaagcccactggggaggccggcagcctg cccaccaccggcttcgtcacactggggagactggccaaggcccggggcccccggagcagc tcagcctcgttccagctccagatgctacagattgtgtgcagtgactcctgggcagaggag gacaggtgctgcgagctcccggcttcgaaggatggagagacctgccctgccttcccttct gcctgtgcatgttcctcgcagacccctgggcccccgggcccccaaggacctcctggccac cctgggagggacggagccccaggagagcagggcttcccagggcccaggggtccaccaggg gtcaaaggagagaagggggaccatggacgccccggcttgcagggccaccccggcctccag ggcacccctgggaaggttggcgtccagggaccaaagggaatgagaggcctggaggggact gctggcctgcccggaccccctggccctaggggcttccagggcacggcgggggccagaggc agcagcggggagcgaggacccccgggggctgtggggcccacggggctgccggggcccaag ggggagcgaggagagaagggcgagccacagtccttggccaccatctaccagctcgtgggc caggcctcgcacctgctgaagctccacgcctgcacccacgagagcacccggccccccatg cccatcttggaggcccccagggccttcggcacgcgcagagaggcccggcttcctggagaa ggggggcacggtggcccccgcccagaggacagagatgctgatgctgagatggacggagaa gttgatgaggggagacggagcttgtggcctcgatgcgggggaaggagacgggggggcgtg ggaggtggcggctgggacgacagttctgcgccgagggcgggggtggacggggatgggcgg cgaagggacccctccccgaccgcacccaccacagtcccccagacattgtcgctgccgtgt gtgccccccgttcgtacctgccgtccaaagctggcaggcgctgtcatgacgcccacccca gccccctcccccgtccccaccacgcactaa

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