Phocoena sinus (vaquita): 116739849
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Entry
116739849 CDS
T07759
Symbol
SEC23B
Name
(RefSeq) protein transport protein Sec23B isoform X1
KO
K14006
protein transport protein SEC23
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116739849 (SEC23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116739849 (SEC23B)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116739849 (SEC23B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
116739849
NCBI-ProteinID:
XP_032460527
Ensembl:
ENSPSNG00000005676
UniProt:
A0A8C9BIU2
LinkDB
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Position
15:complement(48200561..48240717)
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AA seq
767 aa
AA seq
DB search
MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACILTPLKERPDLPPVQYEPVL
CSRPTCKAILNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQPAELMPQFSTVEYV
IQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSC
EGISKSYVFRGTKDLTAKQIQDMLGLTKPAVPVHPARPAQPQEHPSISSRFLQPIHKIDM
NLTDLLGELQRDPWPVPQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFIGGPPTQGP
GMVVGDELKVPIRSWHDIEKDNARFMKKATKHYEMLANRAAANGHCIDIYACALDQTGLL
EMKCCTNLTGGHMVMGDSFNTSLFKQTFQRIFSKDFNGNFRMAFGATLEVKTSRELKVAG
AIGPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNAPIPQGGRGA
IQFVTHYQHSSTQRRIRVTTIARNWADAQSQLKHIEAAFDQEAAAVLMARLGVFRAESEE
GPDVLRWLDRQLIRLCQKFGQYTKEDPASFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPD
ESSYYRHHFARQDLTQSLIMIQPILYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVI
YLGETIAQWQKAGYQDMPEYENFKHLLQAPLDDAQEILHARFPMPRYINTEHGGSQARFL
LSKVNPSQTHNNLYAWGQETGAPILTDDVSLQVFMDHLKKLAVSSAC
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatacctggaattcattcagcagaatgaagaacgcgatggcgtgcgttttagt
tggaatgtgtggccttccagccgtctcgaggctacaagaatggttgttcccctggcttgt
atccttactcctttgaaagaacgtccagacctgccccctgtacagtatgaaccagtgctt
tgcagcaggccaacttgcaaagccatcctcaatccactttgtcaggttgattatcgagca
aagctttgggcttgtaatttctgtttccaaagaaatcagtttcctccggcttatgcaggc
atatctgaggtgaatcagcctgctgaattgatgccccagttttctacagttgagtacgtg
atacagcgaggtgctcagtcccctctgatctttctctatgtggtggacacatgcctggaa
gaagacgacctccaggcactcaaggaatccctgcagatgtccctgagtctccttcctcca
gatgcgctggtgggcttgatcacgtttgggaggatggtgcaggtccatgaactcagctgt
gaggggatttccaagagttatgtcttccgggggacgaaggatttaactgcaaagcagata
caggacatgctgggcctgaccaagcctgccgtgcccgtgcacccagcgcgcccagcacag
ccacaggagcacccttccatttccagcagatttctgcagcccattcacaagatcgacatg
aacctcactgatcttcttggggagctgcagagggacccatggcccgtacctcaggggaag
agaccgttgcgatccactggtgttgctttgtccattgctgttggcttgttggagggcact
tttccaaacacgggagccaggattatgctgtttattgggggtccccctacccaaggacct
ggcatggtggttggagatgaactaaaggttcctattcgttcctggcacgatattgagaaa
gataacgcccgcttcatgaaaaaggcaaccaagcactatgagatgcttgctaaccgagct
gctgcaaatggtcactgcatcgatatttacgcttgtgccctcgatcagactggacttcta
gagatgaagtgctgcacaaaccttactggaggccacatggtgatgggagattctttcaac
acttctctcttcaagcagacattccaaagaatttttagtaaagattttaatggcaatttc
cgaatggcatttggtgctacattggaagtaaagacctcgcgggaactgaaggttgctgga
gccataggcccttgtgtgtctctgaacgtgaaaggaccatgtgtgtcagaaaatgagctt
ggtgttggtggcacgagtcagtggaaaatctgtggcctggatcccacgtctacgctcggc
atctactttgaagtagtcaatcagcacaacgccccgatcccgcaggggggccgcggcgcc
atccagttcgtcacgcactaccagcactccagcacccagcggcgcatccgcgtgactacc
atcgcccgcaattgggcagatgcacagagtcagctcaaacacatcgaagcagcgtttgac
caggaggctgcagcggtcctgatggcgcggctgggagtgttccgagcggagtcggaggag
gggccagatgtgctccggtggctggaccgacagctcatccgactgtgtcagaagtttgga
caatataccaaagaagaccccgcatcttttaggttatcagattccttctctctatatcct
cagttcatgttccatctgaggaggtctccgtttcttcaagtcttcaacaacagccctgat
gagtcgtcgtattatcgacaccactttgcccgacaggacctaacccagtccctcatcatg
atccagcccatcctctactcctattccttccacgggccgccagagcctgtgctcctggac
agtagcagcattctagctgacagaattttgctgatggacacattcttccaaattgtcatt
tatcttggtgagaccatagcccagtggcagaaagcaggctaccaggacatgcctgagtac
gaaaacttcaagcaccttctgcaggcacccctggacgatgctcaggagatcctgcacgcg
cgcttccccatgccacggtacatcaacacggagcacggaggcagccaggctcgcttcctt
ttgtccaaagtgaatccatctcagacacacaataacctgtatgcttggggacaggaaaca
ggagcgcccatcctgactgatgacgttagcctgcaggtgttcatggaccatttgaagaaa
ctggctgtctccagtgcctgctga
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integrated database retrieval system
